RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 C20orf96Q9NUD7 363 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PLK2Q9NYY3 685 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 LEFTY2O00292 366 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 KDELR3O43731 214 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZWINTO95229 277 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 RHOP08100 348 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 AVPR1AP37288 418 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ERVK-21P61565 698 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 IHHQ14623 411 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 TEAD2Q15562 447 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PCID2Q5JVF3 399 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 LINGO4Q6UY18 593 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 RANBP10Q6VN20 620 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 MARK2Q7KZI7 788 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 TDRD5Q8NAT2 981 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 LRRC8CQ8TDW0 803 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF75CPQ92670 426 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ATXN7L3BQ96GX2 97 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF599Q96NL3 588 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 VPS45Q9NRW7 570 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 VPS28Q9UK41 221 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PHTF1Q9UMS5 762 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 SNAP91O60641 907 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 PTPN2P17706 415 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 MZF1P28698 734 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC18A1P54219 525 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 NTHL1P78549 312 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SHHQ15465 462 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 FBXW10Q5XX13 1052 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 PACS1Q6VY07 963 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 TRPM8Q7Z2W7 1104 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 KCNMB4Q86W47 210 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 MFN1Q8IWA4 741 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 AGAP2Q99490 1192 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SEPT3Q9UH03 358 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHD9Q3L8U1 2897 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 RFPL1O75677 317 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SCTRP47872 440 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SERPINB9P50453 376 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 ACTN3Q08043 901 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 GPM6BQ13491 265 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC5A9Q2M3M2 681 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 PKN3Q6P5Z2 889 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 SH3RF2Q8TEC5 729 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 KIFC1Q9BW19 673 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 IARS2Q9NSE4 1012 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 PRKAG3Q9UGI9 489 aa12.85□□□□□ -0.35
TNFAIP3-209ENST00000619035 DOCK6Q96HP0 2047 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 XYLBO75191 536 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 UBOX5O94941 541 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 GMPRP36959 345 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 PBX2P40425 430 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 CSKP41240 450 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 ABCG1P45844 678 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 RGRP47804 291 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 SCNN1BP51168 640 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 NEK3P51956 506 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 OVGP1Q12889 678 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 POTEHQ6S545 545 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 HTR3DQ70Z44 454 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 ALKBH8Q96BT7 664 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 MTBPQ96DY7 904 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 MECRQ9BV79 373 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 ACE2Q9BYF1 805 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 PCMTD2Q9NV79 361 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC2A6Q9UGQ3 507 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 TCAF1Q9Y4C2 921 aa12.84□□□□□ -0.35
TNFAIP3-209ENST00000619035 VAPBO95292 243 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 SERPINF2P08697 491 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 ARF5P84085 180 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 NAB1Q13506 487 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 GALNT3Q14435 633 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 SIRPB2Q5JXA9 342 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 ESRP1Q6NXG1 681 aaKnown RBP12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.35
TNFAIP3-209ENST00000619035 OTOAQ7RTW8 1153 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms