RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 UBDO15205 165 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PEX11AO75192 247 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DNAJB1P25685 340 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 S100GP29377 79 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NNMTP40261 264 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CBX5P45973 191 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DPYSL3Q14195 570 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SGO1Q5FBB7 561 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PKN3Q6P5Z2 889 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GDPD5Q8WTR4 605 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 POF1BQ8WVV4 589 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GTPBP2Q9BX10 602 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PLEKHA5Q9HAU0 1116 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PAK5Q9P286 719 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DTNAQ9Y4J8 743 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SNX13Q9Y5W8 968 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 UBE2QL1A1L167 161 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 BUD23O43709 281 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CPB1P15086 417 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MYL7Q01449 175 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TBC1D25Q3MII6 688 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RBM44Q6ZP01 1051 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CYP4Z1Q86W10 505 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ELMOD2Q8IZ81 293 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ETNPPLQ8TBG4 499 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TMCO6Q96DC7 493 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MED30Q96HR3 178 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FRMD6Q96NE9 622 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 EBF3Q9H4W6 596 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PCDHGC3Q9UN70 934 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RSBN1Q5VWQ0 802 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC9A4Q6AI14 798 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 BORAQ6PGQ7 559 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GOLM1Q8NBJ4 401 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF347Q96SE7 839 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PDGFCQ9NRA1 345 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FBXO40Q9UH90 709 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 UBQLN1Q9UMX0 589 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 NINQ8N4C6 2090 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 USP12O75317 370 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ANXA9O76027 345 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FOSL2P15408 326 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MASP1P48740 699 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CD81P60033 236 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MVKQ03426 396 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ANKDD1AQ495B1 522 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PAGE2BQ5JRK9 111 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GPR158Q5T848 1215 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FBXO42Q6P3S6 717 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GALNT18Q6P9A2 607 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF572Q7Z3I7 529 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 RALGPS2Q86X27 583 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 SMURF2Q9HAU4 748 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NDUFAF4Q9P032 175 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CD300AQ9UGN4 299 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PRKAB1Q9Y478 270 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZBTB5O15062 677 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 S100PP25815 95 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 INHBCP55103 352 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PHC1P78364 1004 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DMP1Q13316 513 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PID1Q7Z2X4 250 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RBM17Q96I25 401 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 GCNAQ96QF7 691 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MNTQ99583 582 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TRMOQ9BU70 441 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC25A23Q9BV35 468 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 AS3MTQ9HBK9 375 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 XPNPEP1Q9NQW7 623 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DDX43Q9NXZ2 648 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CYB5R1Q9UHQ9 305 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RPS6KA6Q9UK32 745 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TRHDEQ9UKU6 1024 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FIS1Q9Y3D6 152 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PCDH11XQ9BZA7 1347 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CFAP65Q6ZU64 1925 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PRR5-ARHGAP8B1AHC4 643 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PPP6CO00743 305 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TBX10O75333 385 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ULK1O75385 1050 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TFEBP19484 476 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ELK3P41970 407 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MAGEA6P43360 314 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RGS4P49798 205 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RPL10AP62906 217 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 ARHGAP8P85298 464 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MAPK7Q13164 816 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 IRF5Q13568 498 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 C16orf86Q6ZW13 317 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 EXD1Q8NHP7 514 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RAB2BQ8WUD1 216 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PELOQ9BRX2 385 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 RTKNQ9BST9 563 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SACM1LQ9NTJ5 587 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PRPF19Q9UMS4 504 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 NUMA1Q14980 2115 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TESPA1A2RU30 521 aaPredicted RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 C5orf60A6NFR6 353 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 SEC24DO94855 1032 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms