RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 PGBD5Q8N414 524 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 OR52K2Q8NGK3 314 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 BLOC1S5Q8TDH9 187 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 TSNARE1Q96NA8 513 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 BTBD10Q9BSF8 475 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 ACE2Q9BYF1 805 aaPredicted RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 RHOJQ9H4E5 214 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 SAR1AQ9NR31 198 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 E9PBE3 544 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 G3V2L1 256 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 PSMD3O43242 534 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CACNG3O60359 315 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 KLHL41O60662 606 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 NAGLUP54802 743 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 IRX1P78414 480 aaPredicted RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 HNRNPDQ14103 355 aaKnown RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 RPS27LQ71UM5 84 aaKnown RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 ZNF683Q8IZ20 524 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CCNYL1Q8N7R7 359 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 SPPL2BQ8TCT7 592 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 AUTS2Q8WXX7 1259 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 C1orf74Q96LT6 269 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 APOBEC2Q9Y235 224 aaKnown RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 SLC38A8A6NNN8 435 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 MUSKO15146 869 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 GSC2O15499 205 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 ANP32DO95626 131 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 SLC35E2BP0CK96 405 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CALB2P22676 271 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 VEGFBP49765 207 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 TAS2R39P59534 338 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CSHL1Q14406 222 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 TAF12Q16514 161 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CCDC153Q494R4 210 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 FSTL5Q8N475 847 aaPredicted RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 SMIM14Q96QK8 99 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 NUDCD1Q96RS6 583 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 GPR22Q99680 433 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 GATA5Q9BWX5 397 aaPredicted RBP12.54□□□□□ -0.4
CIITA-212ENST00000618207 RNF208Q9H0X6 261 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 TMEM248Q9NWD8 314 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 FBXO5Q9UKT4 447 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 CRYL1Q9Y2S2 319 aa12.54□□□□□ -0.4
CIITA-212ENST00000618207 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 MPSTP25325 297 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 SLC6A4P31645 630 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 SLC8A1P32418 973 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 MAGEA11P43364 429 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 ARSDP51689 593 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 PLK1P53350 603 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 SLC12A2P55011 1212 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CSE1LP55060 971 aaKnown RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 RIPK1Q13546 671 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 INSCQ1MX18 579 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 AFMIDQ63HM1 303 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 TEX9Q8N6V9 391 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 HDAC10Q969S8 669 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CYP2S1Q96SQ9 504 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CYP4F12Q9HCS2 524 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 A0A0U1RQS6 177 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 MPOP05164 745 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 STMN1P16949 149 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 TACR2P21452 398 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CDK7P50613 346 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 ZNF235Q14590 738 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 POTEHQ6S545 545 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 KDELC1Q6UW63 502 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CENPLQ8N0S6 344 aaPredicted RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 RBM15BQ8NDT2 890 aaKnown RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 DTX3LQ8TDB6 740 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 IMP4Q96G21 291 aaKnown RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 THTPAQ9BU02 230 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
CIITA-212ENST00000618207 CYP4F11Q9HBI6 524 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
CIITA-212ENST00000618207 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.4
CIITA-212ENST00000618207 F5H5T6 163 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 TRIM13O60858 407 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms