RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ZNF77Q15935 545 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 TAF12Q16514 161 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 LPAL2Q16609 132 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 NFE2Q16621 373 aaPredicted RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 CFAP221Q4G0U5 840 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 TIGD2Q4W5G0 525 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 DCAF17Q5H9S7 520 aaPredicted RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 Q6YL49 198 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 ITIH5Q86UX2 942 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 CMTM8Q8IZV2 173 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 GUF1Q8N442 669 aaKnown RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 DCLK2Q8N568 766 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 LEMD2Q8NC56 503 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 PCDH19Q8TAB3 1148 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 MYCBPAPQ8TBZ2 947 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 SLC2A14Q8TDB8 520 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 C2orf15Q8WU43 125 aaKnown RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 DEPDC1BQ8WUY9 529 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 FAM3CQ92520 227 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 DNASE1L2Q92874 299 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 KAT5Q92993 513 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 MED15Q96RN5 788 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 SMOQ99835 787 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 KCNH6Q9H252 994 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 LINC00597Q9H2U6 94 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 SNX25Q9H3E2 840 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 KIAA1586Q9HCI6 787 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 GKN1Q9NS71 199 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 OSER1Q9NX31 292 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 HSFX1Q9UBD0 423 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 MAGEC2Q9UBF1 373 aaPredicted RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 CBLCQ9ULV8 474 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 VWA7Q9Y334 891 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 ASB3Q9Y575 518 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 MYO16Q9Y6X6 1858 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 HELZP42694 1942 aaKnown RBP4.83□□□□□ -1.64
CUL3-216ENST00000617432 VPS13AQ96RL7 3174 aa4.83□□□□□ -1.64
CUL3-216ENST00000617432 FAM170AA1A519 330 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 HHLA1C9JL84 531 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 LEFTY2O00292 366 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 TULP2O00295 520 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 WNT9AO14904 365 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ZNF185O15231 689 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CHADO15335 359 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 MPIG6BO95866 241 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 EGFP01133 1207 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 MMEP08473 750 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 PAX3P23760 479 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 PCSK1P29120 753 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CDC25CP30307 473 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 MAGEA11P43364 429 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 PXNP49023 591 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 KPNA1P52294 538 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 SLC5A3P53794 718 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ELLP55199 621 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 MAP3K7CLP57077 242 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 SNRPFP62306 86 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 RPL10AP62906 217 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 NUCB2P80303 420 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 APBA1Q02410 837 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CSTF1Q05048 431 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 MTF1Q14872 753 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CAMK4Q16566 473 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ARHGAP15Q53QZ3 475 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ZNF667Q5HYK9 610 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ZNF658Q5TYW1 1059 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 KLHL10Q6JEL2 608 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 FSTL4Q6MZW2 842 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 DENND5BQ6ZUT9 1274 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 MAMDC2Q7Z304 686 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 MON1AQ86VX9 555 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ZC3H3Q8IXZ2 948 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 YAF2Q8IY57 180 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ADSSL1Q8N142 457 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 HIPK4Q8NE63 616 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 SPATA20Q8TB22 786 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 GOLGA5Q8TBA6 731 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 NDRG1Q92597 394 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 MRPS31Q92665 395 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 PTPRN2Q92932 1015 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 SYAP1Q96A49 352 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 CLDN23Q96B33 292 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 ERLEC1Q96DZ1 483 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 FUBP3Q96I24 572 aaKnown RBP eCLIP4.82□□□□□ -1.64
CUL3-216ENST00000617432 IPO9Q96P70 1041 aaKnown RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 GCNAQ96QF7 691 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CDC6Q99741 560 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 MED10Q9BTT4 135 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 LMAN1LQ9HAT1 526 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 NMUR1Q9HB89 426 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 CHORDC1Q9UHD1 332 aaPredicted RBP4.82□□□□□ -1.64
CUL3-216ENST00000617432 CPQQ9Y646 472 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 KIAA1549LQ6ZVL6 1849 aa4.82□□□□□ -1.64
CUL3-216ENST00000617432 TRAV19A0A0A6YYK7 116 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms