RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TRAPPC12Q8WVT3 735 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 HPDLQ96IR7 371 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 GLT1D1Q96MS3 346 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SGIP1Q9BQI5 828 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NPLQ9BXD5 320 aaPredicted RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 SLC2A11Q9BYW1 496 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 PORCNQ9H237 461 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SIAEQ9HAT2 523 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 POU2F3Q9UKI9 436 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ACOT9Q9Y305 439 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TMED5Q9Y3A6 229 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 FAM32AQ9Y421 112 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 NRAPQ86VF7 1730 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TRPC5OSA6NMA1 111 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TMEM114B3SHH9 223 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MFSD11O43934 449 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NRP2O60462 931 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CRCPO75575 148 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SNAP29O95721 258 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 PRKCGP05129 697 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TPSB2P20231 275 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CHRM3P20309 590 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ATP6V1B2P21281 511 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 GPD2P43304 727 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SEPHS1P49903 392 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 LIMK2P53671 638 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CDH13P55290 713 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ADAM17P78536 824 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DGCR6Q14129 220 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 POU6F1Q14863 301 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MAPRE2Q15555 327 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TPSAB1Q15661 275 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CRY2Q49AN0 593 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 VPS26BQ4G0F5 336 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 HMBOX1Q6NT76 420 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 PMF1Q6P1K2 205 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 STK32CQ86UX6 486 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TTC30AQ86WT1 665 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CNTD1Q8N815 330 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 OR2T34Q8NGX1 318 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 OR2T3Q8NH03 318 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ELMO1Q92556 727 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 GLMNQ92990 594 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 RNF145Q96MT1 663 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CSPG4P5Q96PW8 444 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MIR1-1HGQ9H1L0 117 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 EHD1Q9H4M9 534 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NRBP2Q9NSY0 501 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CACNA2D2Q9NY47 1150 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NCKIPSDQ9NZQ3 722 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 IFT80Q9P2H3 777 aaPredicted RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 SEPT3Q9UH03 358 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CNTN6Q9UQ52 1028 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 PCDHGA7Q9Y5G6 932 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SYCE1LA8MT33 242 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 GNGT2O14610 69 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TIMM44O43615 452 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DLX3O60479 287 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 GCATO75600 419 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 RSL1D1O76021 490 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 BAIAP3O94812 1187 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DLGAP3O95886 979 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MPOP05164 745 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ASNSP08243 561 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MATN1P21941 496 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 SERPINB1P30740 379 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 OPRL1P41146 370 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 AP3M2P53677 418 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NIPAL4Q0D2K0 466 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DACT2Q5SW24 774 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 STRIP1Q5VSL9 837 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NIPA1Q7RTP0 329 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 ADCK1Q86TW2 530 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 CCDC185Q8N715 623 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 NSUN6Q8TEA1 469 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 TRPC4APQ8TEL6 797 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 TFAP2CQ92754 450 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MCRS1Q96EZ8 462 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 MUC3BQ9H195 1237 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 LHX5Q9H2C1 402 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 QTRT2Q9H974 415 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 ABCB10Q9NRK6 738 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DDX28Q9NUL7 540 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 EXD2Q9NVH0 621 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 DUS2Q9NX74 493 aaKnown RBP6.74□□□□□ -1.33
LMO3-235ENST00000616247 SNX5Q9Y5X3 404 aa6.74□□□□□ -1.33
LMO3-235ENST00000616247 HUS1O60921 280 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 XYLBO75191 536 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 CABYRO75952 493 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SLC4A1P02730 911 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SUPT20HL2P0C7V6 817 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 VDRP11473 427 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 CLDN10P78369 228 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms