RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 A0A087WXM4 84 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 INPP4BO15327 924 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 DLX3O60479 287 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 TADA2AO75478 443 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 ENDOD1O94919 500 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 MYCLP1P12525 358 aaPredicted RBP13.31□□□□□ -0.28
MSH6-214ENST00000616033 CDH3P22223 829 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 SULT1E1P49888 294 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 SLC6A3Q01959 620 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 PPP1R8Q12972 351 aaKnown RBP13.31□□□□□ -0.28
MSH6-214ENST00000616033 PRKAA1Q13131 559 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 LIPMQ5VYY2 423 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 MPZL3Q6UWV2 235 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 KCTD8Q6ZWB6 473 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 GPR180Q86V85 440 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 SLC15A4Q8N697 577 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 APBB2Q92870 758 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 CCDC90BQ9GZT6 254 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 MUC3BQ9H195 1237 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 OAZ3Q9UMX2 235 aa13.31□□□□□ -0.28
MSH6-214ENST00000616033 UBDO15205 165 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 BMXP51813 675 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 LIMK2P53671 638 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 SLC12A2P55011 1212 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 RAB39AQ14964 217 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 STXBP2Q15833 593 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 REP15Q6BDI9 236 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 HEATR4Q86WZ0 1026 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 DLG3Q92796 817 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 SLCO4A1Q96BD0 722 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 DAPK2Q9UIK4 370 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 H3BMQ9 156 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 PCNAP12004 261 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 MAGP20916 626 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 EEF1DP29692 281 aaKnown RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 MAGEA3P43357 314 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 AP3M2P53677 418 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 COG8Q96MW5 612 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 LRRC40Q9H9A6 602 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 RABL2AQ9UBK7 228 aaPredicted RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 EI24O14681 340 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 SRP72O76094 671 aaKnown RBP13.3□□□□□ -0.28
MSH6-214ENST00000616033 CNSTQ6PJW8 725 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 DNAJB14Q8TBM8 379 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 HPS1Q92902 700 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 KCNN1Q92952 543 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 PPP1R14BQ96C90 147 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 ADI1Q9BV57 179 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
MSH6-214ENST00000616033 ZBTB24O43167 697 aaPredicted RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 ATP6V1B2P21281 511 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PRDX6P30041 224 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 RHDQ02161 417 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 TMEM132BQ14DG7 1078 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 DCDC5Q6ZRR9 648 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PIWIL3Q7Z3Z3 882 aaKnown RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 CROCCP3Q8IVE0 287 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 QKIQ96PU8 341 aaKnown RBP eCLIP13.29□□□□□ -0.28
MSH6-214ENST00000616033 ING2Q9H160 280 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PRELID1Q9Y255 219 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CNTNAP1P78357 1384 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CCL22O00626 93 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PARNO95453 639 aaKnown RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 JCHAINP01591 159 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 VTNP04004 478 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 ELK4P28324 431 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 BCAP31P51572 246 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 YBX1P67809 324 aaKnown RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 SPIDRQ14159 915 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 RPS6KA2Q15349 733 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 GPR162Q16538 588 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PGS1Q32NB8 556 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 VPS26BQ4G0F5 336 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 ZPBP2Q6X784 338 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 GET4Q7L5D6 327 aaPredicted RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 BTLAQ7Z6A9 289 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CARM1Q86X55 608 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 DEFB106AQ8N104 65 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 SGCDQ92629 289 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms