RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CHRM3P20309 590 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 CDK9P50750 372 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 ZNF132P52740 706 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 MAP3K7CLP57077 242 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 REP15Q6BDI9 236 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 TRNP1Q6NT89 227 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 TMEM214Q6NUQ4 689 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 C4orf22Q6V702 233 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 NCCRP1Q6ZVX7 275 aaPredicted RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 OR52K2Q8NGK3 314 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 BORCS5Q969J3 196 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 FAM167AQ96KS9 214 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 ZMAT2Q96NC0 199 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 BRD8Q9H0E9 1235 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 PNPLA8Q9NP80 782 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 CIDEBQ9UHD4 219 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 SLC8A2Q9UPR5 921 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.51
CDH5-208ENST00000614547 DENRO43583 198 aaKnown RBP11.9□□□□□ -0.51
CDH5-208ENST00000614547 FBXO21O94952 628 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 TPSB2P20231 275 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 CCNA2P20248 432 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 ARL2P36404 184 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 PIGFQ07326 219 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 TPSAB1Q15661 275 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 ZNF423Q2M1K9 1284 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 CHSY3Q70JA7 882 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 PSTKQ8IV42 348 aaKnown RBP11.9□□□□□ -0.51
CDH5-208ENST00000614547 CENPSQ8N2Z9 138 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.51
CDH5-208ENST00000614547 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 CAPSLQ8WWF8 208 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 PLEKHA8Q96JA3 519 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 MINDY3Q9H8M7 445 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 EXD2Q9NVH0 621 aa11.9□□□□□ -0.51
CDH5-208ENST00000614547 MT-CYBP00156 380 aaPredicted RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 APOA4P06727 396 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 L1CAMP32004 1257 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 KCTD2Q14681 263 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 ARL13BQ3SXY8 428 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 AARS2Q5JTZ9 985 aaKnown RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 DCAF15Q66K64 600 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 HBEGFQ99075 208 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 MORF4L1Q9UBU8 362 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 GCATO75600 419 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TRPC1P48995 793 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 METTL21CQ5VZV1 264 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 HTRA1Q92743 480 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 DACH2Q96NX9 599 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TUT1Q9H6E5 874 aaKnown RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 VTI1BQ9UEU0 232 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 SIX4Q9UIU6 781 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 PNMA8BQ9ULN7 279 aaPredicted RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 MATN2O00339 956 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 SOCS2O14508 198 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 PPEF2O14830 753 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 BTAF1O14981 1849 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 B4GAT1O43505 415 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 DLX3O60479 287 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 MSCO60682 206 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 BCAS2O75934 225 aaPredicted RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 PAMP19021 973 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 NR2C2P49116 596 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 UGP2Q16851 508 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 SGO1Q5FBB7 561 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TTC30AQ86WT1 665 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 RALGPS2Q86X27 583 aaPredicted RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 BEST2Q8NFU1 509 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TNIP2Q8NFZ5 429 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
CDH5-208ENST00000614547 SLC25A23Q9BV35 468 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 ZNF232Q9UNY5 417 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 NDUFAF1Q9Y375 327 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 RAD54BQ9Y620 910 aa11.89□□□□□ -0.51
CDH5-208ENST00000614547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.88□□□□□ -0.51
CDH5-208ENST00000614547 TMEM114B3SHH9 223 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 SUPT3HB4E1H0 165 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 C9IYK1 514 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 SLCO1B7G3V0H7 640 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 CABYRO75952 493 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 RGS20O76081 388 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 LDLRP01130 860 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 NDUFV1P49821 464 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 BACE1P56817 501 aa11.88□□□□□ -0.51
CDH5-208ENST00000614547 GJA9P57773 515 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms