RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 NDUFAF2Q8N183 169 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
CNOT3-208ENST00000613073 NDFIP2Q9NV92 336 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 DMTF1Q9Y222 760 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 POMPQ9Y244 141 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 ARHGEF37A1IGU5 675 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 LYPLA1O75608 230 aaPredicted RBP16.69■□□□□ 0.26
CNOT3-208ENST00000613073 IGLV3-25P01717 112 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 PIM1P11309 404 aaPredicted RBP16.69■□□□□ 0.26
CNOT3-208ENST00000613073 TPH1P17752 444 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 PGAM1P18669 254 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
CNOT3-208ENST00000613073 MYBPC1Q00872 1141 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 TEX44Q53QW1 395 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 C6orf52Q5T4I8 152 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 ATAD1Q8NBU5 361 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 FNDC8Q8TC99 324 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 FCRL2Q96LA5 508 aaPredicted RBP16.69■□□□□ 0.26
CNOT3-208ENST00000613073 TIMMDC1Q9NPL8 285 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 AP4B1Q9Y6B7 739 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 CCDC78A2IDD5 438 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 FOXD2O60548 495 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 PBX3P40426 434 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 NAA20P61599 178 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 STEAP4Q687X5 459 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 OTOP3Q7RTS5 596 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 FCRL3Q96P31 734 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 MLPHQ9BV36 600 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 CRTAMO95727 393 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 AP2A1O95782 977 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 CCR1P32246 355 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 VARS2Q5ST30 1063 aaKnown RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 ABI1Q8IZP0 508 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 ARL10Q8N8L6 244 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 TMIGD2Q96BF3 282 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 MPP6Q9NZW5 540 aa16.68■□□□□ 0.26
CNOT3-208ENST00000613073 HBS1LQ9Y450 684 aaKnown RBP16.68■□□□□ 0.26
CNOT3-208ENST00000613073 NT5C1B-RDH14C9J2C7 533 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 INPPL1O15357 1258 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 ALDH1A2O94788 518 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 POLBP06746 335 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 COPAP53621 1224 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 FAM189BP81408 668 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 EIF4EBP2Q13542 120 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-208ENST00000613073 C16orf72Q14CZ0 275 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 LRRC8DQ7L1W4 858 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 SCML4Q8N228 414 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 DBF4BQ8NFT6 615 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 RAB3IL1Q8TBN0 382 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 SLC35B4Q969S0 331 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 ATXN7L3BQ96GX2 97 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 OSBPL2Q9H1P3 480 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 GBA3Q9H227 469 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 VANGL2Q9ULK5 521 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 NEU3Q9UQ49 428 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 PLLPQ9Y342 182 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 RAD54BQ9Y620 910 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 ARHGAP10A1A4S6 786 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 H3BNX3 289 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 PEX1O43933 1283 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 OAZ2O95190 189 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 SERPINA6P08185 405 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 CNTD1Q8N815 330 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 CDKL2Q92772 493 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 ZNF669Q96BR6 464 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-208ENST00000613073 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 SLC27A5Q9Y2P5 690 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 TET1Q8NFU7 2136 aa16.67■□□□□ 0.26
CNOT3-208ENST00000613073 NBNO60934 754 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 GMPRP36959 345 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ENTPD1P49961 510 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 NIPAL4Q0D2K0 466 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ANKDD1AQ495B1 522 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 CTXN3Q4LDR2 81 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 GRAMD4Q6IC98 578 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 PACS1Q6VY07 963 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 C14orf80Q86SX3 495 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 DCP1BQ8IZD4 617 aaKnown RBP16.66■□□□□ 0.26
CNOT3-208ENST00000613073 SPATA22Q8NHS9 363 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ERLEC1Q96DZ1 483 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 TRIM62Q9BVG3 475 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 FRMPD3Q5JV73 1810 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ARVCFO00192 962 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 TBX18O95935 607 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 PAX3P23760 479 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 CD97P48960 835 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ATG16L1Q676U5 607 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 MARVELD2Q8N4S9 558 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 MFSD3Q96ES6 412 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ZNF419Q96HQ0 510 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms