RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ARHGAP24Q8N264 748 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 TXNDC5Q8NBS9 432 aaKnown RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 SLC26A7Q8TE54 656 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 SMIM14Q96QK8 99 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 TBC1D13Q9NVG8 400 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 ACOT9Q9Y305 439 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 VWA8A3KMH1 1905 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 MIA3Q5JRA6 1907 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 CLGNO14967 610 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 ANXA9O76027 345 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 KLHL2O95198 593 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 CKBP12277 381 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 TFEBP19484 476 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 HOXC13P31276 330 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 CDK7P50613 346 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 FCGRTP55899 365 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 RAB10P61026 200 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 CCNIQ14094 377 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 BRMS1LQ5PSV4 323 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 MYLK4Q86YV6 388 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 PGBD5Q8N414 524 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 DDX50Q9BQ39 737 aaKnown RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 FBXO5Q9UKT4 447 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 DSEQ9UL01 958 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 SSX2IPQ9Y2D8 614 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 CDY1Q9Y6F8 540 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 TARM1B6A8C7 271 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 STX16-NPEPL1H3BU86 382 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 PRSS56P0CW18 603 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 STMN1P16949 149 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 ACVRL1P37023 503 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 TBX4P57082 545 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 SLC12A1Q13621 1099 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 BLMHQ13867 455 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 DBN1Q16643 649 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 RASIP1Q5U651 963 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 LIPMQ5VYY2 423 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 LPCAT4Q643R3 524 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 GLB1LQ6UWU2 654 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 PIM3Q86V86 326 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 SNX32Q86XE0 403 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 STYXQ8WUJ0 223 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 GPR62Q9BZJ7 368 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 ILKAPQ9H0C8 392 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 TREX1Q9NSU2 369 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 CDH22Q9UJ99 828 aa14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 COL4A4P53420 1690 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA3-202ENST00000612467 TET1Q8NFU7 2136 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 CCDC189A1A4V9 331 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 DPPA5A6NC42 116 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 MATN2O00339 956 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 GEMP55040 296 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 TSNAXIP1Q2TAA8 658 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 FBXL22Q6P050 247 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 KDELC1Q6UW63 502 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 GIPC2Q8TF65 315 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 ANKRD49Q8WVL7 239 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 PCDHB8Q9UN66 801 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 SCAMP3O14828 347 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 MUSKO15146 869 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 FGF10O15520 208 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 MMP2P08253 660 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 NUDT2P50583 147 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 TRMT5Q32P41 509 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 NEPROQ6NW34 567 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 IZUMO2Q6UXV1 221 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 TMEM173Q86WV6 379 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 COLGALT2Q8IYK4 626 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 NUP93Q8N1F7 819 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 USP13Q92995 863 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 DRC3Q9H069 523 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 ZCWPW1Q9H0M4 648 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 CCSER2Q9H7U1 834 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 CRYL1Q9Y2S2 319 aa14.22□□□□□ -0.13
PCDHGA3-202ENST00000612467 DOCK4Q8N1I0 1966 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 CFLARO15519 480 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 TADA2AO75478 443 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 SLC4A1P02730 911 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 GLDCP23378 1020 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 PIK3R1P27986 724 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 RPL14P50914 215 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 PKNOX1P55347 436 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 AFMIDQ63HM1 303 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 ISLR2Q6UXK2 745 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 OR13J1Q8NGT2 312 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 OR6P1Q8NGX9 317 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 EXT2Q93063 718 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
PCDHGA3-202ENST00000612467 SERPINB11Q96P15 392 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms