RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 RNASEH1O60930 286 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 JCHAINP01591 159 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CYP2F1P24903 491 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CLK3P49761 638 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 TAF6P49848 677 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 MAPK12P53778 367 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TOMM20Q15388 145 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 GPSM1Q86YR5 675 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 DNAJB14Q8TBM8 379 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PHB2Q99623 299 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 MSH4O15457 936 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 DCDC1P59894 354 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TEX19Q8NA77 164 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 HDAC2Q92769 488 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 CDH19Q9H159 772 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 RAB21Q9UL25 225 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 SGTAO43765 313 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 HMGCRP04035 888 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 YES1P07947 543 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 FDX1P10109 184 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 EPORP19235 508 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TCF7P36402 384 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZBTB8BQ8NAP8 495 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 LPCAT1Q8NF37 534 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 TBL1YQ9BQ87 522 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 SEMA4BQ9NPR2 832 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 PLAGL2Q9UPG8 496 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 CFAP43Q8NDM7 1665 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TPP1O14773 563 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZMPSTE24O75844 475 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 VDRP11473 427 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 RENBPP51606 427 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 SKP1P63208 163 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 MTX3Q5HYI7 312 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 QSOX2Q6ZRP7 698 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 GALNT15Q8N3T1 639 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ADCY4Q8NFM4 1077 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 OR5T3Q8NGG3 340 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 MAT2BQ9NZL9 334 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 MAST1Q9Y2H9 1570 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TBX22Q9Y458 520 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 SLC30A4O14863 429 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 DBIP07108 87 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 RHOCP08134 193 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 CD40LGP29965 261 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 NFIAQ12857 509 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 LIN52Q52LA3 116 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ANO7Q6IWH7 933 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 GPATCH1Q9BRR8 931 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 DUSP10Q9Y6W6 482 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 ITGB3P05106 788 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 PSMA1P25786 263 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 MAPKAPK3Q16644 382 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 PIWIL2Q8TC59 973 aaKnown RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 RIT2Q99578 217 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TPK1Q9H3S4 243 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 MCIDASD6RGH6 385 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 SERPINA6P08185 405 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 TIE1P35590 1138 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 PDIA6Q15084 440 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZNF433Q8N7K0 673 aaPredicted RBP12.49□□□□□ -0.41
HLCS-207ENST00000612277 CHST4Q8NCG5 386 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 ZNF248Q8NDW4 579 aa12.49□□□□□ -0.41
HLCS-207ENST00000612277 PZPP20742 1482 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 SLC28A1O00337 649 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 SLC33A1O00400 549 aaPredicted RBP12.48□□□□□ -0.41
HLCS-207ENST00000612277 MED24O75448 989 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 SRCP12931 536 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 RPL3P39023 403 aaKnown RBP12.48□□□□□ -0.41
HLCS-207ENST00000612277 IL6STP40189 918 aaPredicted RBP12.48□□□□□ -0.41
HLCS-207ENST00000612277 ALX1Q15699 326 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 PRAMEF17Q5VTA0 474 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 ZNF470Q6ECI4 717 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 THAP5Q7Z6K1 395 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 KCNS3Q9BQ31 491 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
HLCS-207ENST00000612277 ZNF451Q9Y4E5 1061 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms