RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF419Q96HQ0 510 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 HHIPL1Q96JK4 782 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SCYL1Q96KG9 808 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 GPR78Q96P69 363 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PANX3Q96QZ0 392 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TSEN34Q9BSV6 310 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MRPL46Q9H2W6 279 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ELAC1Q9H777 363 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NMRK2Q9NPI5 230 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NDFIP2Q9NV92 336 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TMEM161AQ9NX61 479 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MPP6Q9NZW5 540 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CPSF2Q9P2I0 782 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 E2F8A0AVK6 867 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TMEM88BA6NKF7 163 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 GOLGA8TH3BQL2 631 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 PHGDHO43175 533 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SLC7A4O43246 635 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 MAP3K7O43318 606 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 OR4Q2P0C623 313 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 COX4I1P13073 169 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 HOXB8P17481 243 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TFEBP19484 476 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SLC1A2P43004 574 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 ABCG1P45844 678 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 LEPRP48357 1165 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 MRPS35P82673 323 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 IL10RBQ08334 325 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 USP4Q13107 963 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 CTBP1Q13363 440 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 FAM83EQ2M2I3 478 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 PARP15Q460N3 678 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SLC9B1Q4ZJI4 515 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 ARL13AQ5H913 290 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TMC7Q7Z402 723 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SLC41A1Q8IVJ1 513 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 DENND6AQ8IWF6 608 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SPPL2BQ8TCT7 592 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 KCTD4Q8WVF5 259 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TADA1Q96BN2 335 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 FAR2Q96K12 515 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 SPATA17Q96L03 361 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 TLR8Q9NR97 1041 aaKnown RBP10.55□□□□□ -0.72
PABPC1-224ENST00000610907 NMRK1Q9NWW6 199 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 LRCH1Q9Y2L9 728 aa10.55□□□□□ -0.72
PABPC1-224ENST00000610907 FRMPD3Q5JV73 1810 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 RGSL1A5PLK6 1076 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 TRPC5OSA6NMA1 111 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 F8W810 466 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 TK2O00142 265 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 DCXO43602 365 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 DLX3O60479 287 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 PIGNO95427 931 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 PENKP01210 267 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 EPOP01588 193 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 RBP1P09455 135 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 CPB1P15086 417 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 ANPEPP15144 967 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 SAT1P21673 171 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 ATP5F1P24539 256 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 GMPRP36959 345 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 PBX3P40426 434 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 MAPKAPK2P49137 400 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 NAGLUP54802 743 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 TAS2R39P59534 338 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 MPP1Q00013 466 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 HERC3Q15034 1050 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 DDR2Q16832 855 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 CTXN3Q4LDR2 81 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 VWA5B1Q5TIE3 1220 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 AGAP9Q5VTM2 703 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF470Q6ECI4 717 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF280DQ6N043 979 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 IRGCQ6NXR0 463 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 CEP97Q8IW35 865 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 RP9Q8TA86 221 aaKnown RBP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 C2orf15Q8WU43 125 aaKnown RBP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 NXNL1Q96CM4 212 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 ELMO2Q96JJ3 720 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 CEP295NLQ96MC4 621 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 SP110Q9HB58 689 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 TRPC7Q9HCX4 862 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 NDE1Q9NXR1 346 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 GMIPQ9P107 970 aa10.54□□□□□ -0.72
PABPC1-224ENST00000610907 XPR1Q9UBH6 696 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms