RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 ACBD5Q5T8D3 534 aaPredicted RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 SNX30Q5VWJ9 437 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 NEPROQ6NW34 567 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 CEP97Q8IW35 865 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MFSD6LQ8IWD5 586 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 TEX26Q8N6G2 289 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 C2CD4AQ8NCU7 369 aaPredicted RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MCUR1Q96AQ8 359 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 ELMO2Q96JJ3 720 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 FAM167BQ9BTA0 163 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 ACOT9Q9Y305 439 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 GSC2O15499 205 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 GJB3O75712 270 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 ATP5BP06576 529 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 APOA4P06727 396 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 EZRP15311 586 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 ATP5C1P36542 298 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 CD151P48509 253 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MAPKAPK2P49137 400 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 VEGFBP49765 207 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 PRMT2P55345 433 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MAVSQ7Z434 540 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 CCDC106Q9BWC9 280 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 TTLL2Q9BWV7 592 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 STN1Q9H668 368 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 FBXO5Q9UKT4 447 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 LAMA2P24043 3122 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 PRR5-ARHGAP8B1AHC4 643 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 AURKAO14965 403 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 YBEYP58557 167 aaPredicted RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 ARHGAP8P85298 464 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 USP4Q13107 963 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 ZNF235Q14590 738 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 TSTD2Q5T7W7 516 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEK3-205ENST00000610828 CENPLQ8N0S6 344 aaPredicted RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 FSTL5Q8N475 847 aaPredicted RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 SPATA6LQ8N4H0 392 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 TEX9Q8N6V9 391 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 AGR3Q8TD06 166 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 MOCOSQ96EN8 888 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SEMA3CQ99985 751 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 UNKQ9C0B0 810 aaKnown RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 B2RBV5 119 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 DIAPH2O60879 1101 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SIN3BO75182 1162 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 WFS1O76024 890 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 GJB5O95377 273 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 GM2AP17900 193 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SLC6A4P31645 630 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 TUFMP49411 452 aaKnown RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 IDH3AP50213 366 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SLC12A2P55011 1212 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 TUBB3Q13509 450 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 SIRPB2Q5JXA9 342 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 CNSTQ6PJW8 725 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 TMEM151AQ8N4L1 468 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 CDK5RAP1Q96SZ6 601 aaKnown RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 GATA5Q9BWX5 397 aaPredicted RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 POLR1EQ9GZS1 481 aaKnown RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 DENND2DQ9H6A0 471 aaPredicted RBP13.75□□□□□ -0.21
NEK3-205ENST00000610828 ACSS2Q9NR19 701 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
NEK3-205ENST00000610828 A0A0D9SEW6 157 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 TMEM114B3SHH9 223 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 ACSL4O60488 711 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 PRAMEF11O60813 436 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 SBK3P0C264 359 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 POLD2P49005 469 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 APLP1P51693 650 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 MTA1Q13330 715 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 TBCCQ15814 346 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 CFAP157Q5JU67 520 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 SWT1Q5T5J6 900 aaKnown RBP13.74□□□□□ -0.21
NEK3-205ENST00000610828 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 ZYG11AQ6WRX3 759 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 OR13J1Q8NGT2 312 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 RDH11Q8TC12 318 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 NXNL1Q96CM4 212 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 RANBP9Q96S59 729 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 XPR1Q9UBH6 696 aa13.74□□□□□ -0.21
NEK3-205ENST00000610828 TAGLN3Q9UI15 199 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms