RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NRF1Q16656 503 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 CCDC142Q17RM4 750 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ASTE1Q2TB18 679 aaPredicted RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TRIM16LQ309B1 348 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SETMARQ53H47 684 aaPredicted RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ANKRD22Q5VYY1 191 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 DOK6Q6PKX4 331 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 FAM228AQ86W67 206 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 RDH11Q8TC12 318 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 C9orf16Q9BUW7 83 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 INVSQ9Y283 1065 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SNTNA6NMZ2 147 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 GSSP48637 474 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 PSME3P61289 254 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SNRPD1P62314 119 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SMAD3P84022 425 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 PSMD5Q16401 504 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TRAPPC5Q8IUR0 188 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SNRNP27Q8WVK2 155 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 LRMDAQ9H2I8 198 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 BTRCQ9Y297 605 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 OR4Q2P0C623 313 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PPP2R1BP30154 601 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PTGIRP43119 386 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 HADHBP55084 474 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 IRF8Q02556 426 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 CRELD2Q6UXH1 353 aaPredicted RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 DHRSXQ8N5I4 330 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 TMEM245Q9H330 911 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 RHOJQ9H4E5 214 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 CATP04040 527 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 TAF5Q15542 800 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 BTN2A2Q8WVV5 523 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 GNPTGQ9UJJ9 305 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PRDM4Q9UKN5 801 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 MYRFQ9Y2G1 1151 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT87PA6NCN2 255 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 AGPSO00116 658 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 C2P06681 752 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 HSMCR30P0CW71 290 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PTPN3P26045 913 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PSMB9P28065 219 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 SGCGQ13326 291 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 FNDC3BQ53EP0 1204 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 SCIMPQ6UWF3 145 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 CDYL2Q8N8U2 506 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 MAF1Q9H063 256 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 DPEP3Q9H4B8 488 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PLLPQ9Y342 182 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 C1orf232A0A0U1RR37 186 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 FFAR3O14843 346 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 GPR42O15529 346 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 CNOT3O75175 753 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 ATG7O95352 703 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 GRIA3P42263 894 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 TGM3Q08188 693 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 MFSD4BQ5TF39 518 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 FBXL19Q6PCT2 694 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 MTSS1LQ765P7 747 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 DET1Q7L5Y6 550 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 RD3Q7Z3Z2 195 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 C10orf53Q8N6V4 93 aa14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 THG1LQ9NWX6 298 aaKnown RBP14.37□□□□□ -0.11
PCDHB16-201ENST00000609684 PEX1O43933 1283 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 FGF1P05230 155 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 HGFP14210 728 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 LPOP22079 712 aaPredicted RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 MAPK8P45983 427 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ATRNL1Q5VV63 1379 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 OTOP3Q7RTS5 596 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ZDHHC13Q8IUH4 622 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ACTRT2Q8TDY3 377 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 RCN3Q96D15 328 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ATP13A3Q9H7F0 1226 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ANAPC2Q9UJX6 822 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 VWA7Q9Y334 891 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 TRAV19A0A0A6YYK7 116 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 MDM4O15151 490 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 MLYCDO95822 493 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 RPS7P62081 194 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PFKPQ01813 784 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 MRPL28Q13084 256 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 NEDD8Q15843 81 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 RP9Q8TA86 221 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 TRAPPC9Q96Q05 1148 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 SMAD5Q99717 465 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms