RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SMC6Q96SB8 1091 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 LINC00597Q9H2U6 94 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 RFXAPO00287 272 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 UGT1A9O60656 530 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 KRT37O76014 449 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 PENKP01210 267 aaPredicted RBP21.83■■□□□ 1.08
USP6NL-204ENST00000606752 ERVK-10P10266 1014 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 NMBRP28336 390 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 SERPINB9P50453 376 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 PLK1P53350 603 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 NSUN2Q08J23 767 aaKnown RBP eCLIP21.83■■□□□ 1.08
USP6NL-204ENST00000606752 SLC12A1Q13621 1099 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 CELF5Q8N6W0 485 aaKnown RBP21.83■■□□□ 1.08
USP6NL-204ENST00000606752 IRF7Q92985 503 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 CENPTQ96BT3 561 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 ZNF778Q96MU6 729 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 NUDCD1Q96RS6 583 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 IGFLR1Q9H665 355 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 KIF9Q9HAQ2 790 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 UGT1A7Q9HAW7 530 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 UGT1A10Q9HAW8 530 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 UGT1A8Q9HAW9 530 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 TCAF1Q9Y4C2 921 aa21.83■■□□□ 1.08
USP6NL-204ENST00000606752 LAMA3Q16787 3333 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 HELZP42694 1942 aaKnown RBP21.82■■□□□ 1.08
USP6NL-204ENST00000606752 MT-ND3P03897 115 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 SNRPAP09012 282 aaKnown RBP21.82■■□□□ 1.08
USP6NL-204ENST00000606752 HLA-DPA1P20036 260 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 SIRPB2Q5JXA9 342 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 LMLNQ96KR4 655 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 SCUBE2Q9NQ36 999 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 SPHK2Q9NRA0 654 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 ZFATQ9P243 1243 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 PRKAG3Q9UGI9 489 aa21.82■■□□□ 1.08
USP6NL-204ENST00000606752 SLC9A3R1O14745 358 aaPredicted RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 KRT38O76015 456 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 ATXN1LP0C7T5 689 aaKnown RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 KRT4P19013 534 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 CD70P32970 193 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 BMP8BP34820 402 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 MSLNQ13421 630 aaPredicted RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 PLEKHG6Q3KR16 790 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 RASSF3Q86WH2 238 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 ADGRG2Q8IZP9 1017 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 KIAA1958Q8N8K9 716 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 TIFAQ96CG3 184 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 EXOC2Q96KP1 924 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 RANBP9Q96S59 729 aa21.81■■□□□ 1.08
USP6NL-204ENST00000606752 INTS9Q9NV88 658 aaKnown RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 ARIH1Q9Y4X5 557 aaPredicted RBP21.81■■□□□ 1.08
USP6NL-204ENST00000606752 HEATR9A2RTY3 570 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 CNTFP26441 200 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 GBP2P32456 591 aaPredicted RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 CNPY4Q8N129 248 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 C4orf33Q8N1A6 199 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 MTBPQ96DY7 904 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 BBS2Q9BXC9 721 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 SSU72Q9NP77 194 aaKnown RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 C20orf96Q9NUD7 363 aaPredicted RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 IL1RAPL1Q9NZN1 696 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 LHX3Q9UBR4 397 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 SMG5Q9UPR3 1016 aaKnown RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 CXorf51AA0A1B0GTR3 108 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 PRPF4O43172 522 aaKnown RBP eCLIP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 MT-CO1P00395 513 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 FGF1P05230 155 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 LSP1P33241 339 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 SLC18A1P54219 525 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 SLC20A2Q08357 652 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 MPP2Q14168 576 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 RARS2Q5T160 578 aaKnown RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 TEDDM1Q5T9Z0 273 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 PDPK2PQ6A1A2 396 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 TMEM184AQ6ZMB5 413 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 KCNMB4Q86W47 210 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 TDHQ8IZJ6 230 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 ZNF557Q8N988 423 aaPredicted RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 ALKBH8Q96BT7 664 aaKnown RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 TRIB3Q96RU7 358 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 ABCB8Q9NUT2 735 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 INTS6Q9UL03 887 aaKnown RBP21.8■■□□□ 1.08
USP6NL-204ENST00000606752 WNT6Q9Y6F9 365 aa21.8■■□□□ 1.08
USP6NL-204ENST00000606752 TRIM49D1C9J1S8 452 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 NEDD8-MDP1E9PL57 170 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 NDST3O95803 873 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 FSHRP23945 695 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 HLA-FP30511 346 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 RHOAP61586 193 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 SEPT6Q14141 434 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 RALGPS1Q5JS13 557 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 LY6G5CQ5SRR4 150 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 PACS1Q6VY07 963 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 GPR149Q86SP6 731 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 METTL3Q86U44 580 aaKnown RBP21.79■■□□□ 1.08
USP6NL-204ENST00000606752 RNF135Q8IUD6 432 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 NSMCE3Q96MG7 304 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 CPNE1Q99829 537 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 TREX1Q9NSU2 369 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 NKIRAS1Q9NYS0 192 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms