RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MT-CO3P00414 261 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CSF2P04141 144 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 UGT2B4P06133 528 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 MYF5P13349 255 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 EPHB2P29323 1055 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 EIF2S3P41091 472 aaKnown RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 ABL2P42684 1182 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 YBEYP58557 167 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 PFN3P60673 137 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 HNRNPKP61978 463 aaKnown RBP eCLIP7.73□□□□□ -1.172e-7■■■■□ 23.8
CUX1-219ENST00000606749 DAB2P98082 770 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 SERINC3Q13530 473 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 COL9A2Q14055 689 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 STX1AQ16623 288 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 SOWAHCQ53LP3 525 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 INO80DQ53TQ3 878 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 PPP1R15BQ5SWA1 713 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 ACAD10Q6JQN1 1059 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 GDPD4Q6W3E5 623 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 KYAT3Q6YP21 454 aaKnown RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 TMC6Q7Z403 805 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 IRF2BP2Q7Z5L9 587 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 MCOLN2Q8IZK6 566 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 RTL3Q8N8U3 475 aaKnown RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 DCBLD1Q8N8Z6 715 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 NETO2Q8NC67 525 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CASKIN2Q8WXE0 1202 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 BAP1Q92560 729 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 APOLD1Q96LR9 279 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 DCBLD2Q96PD2 775 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 GBP4Q96PP9 640 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CNPY3Q9BT09 278 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 DUSP23Q9BVJ7 150 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 OSBPL1AQ9BXW6 950 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 TTYH3Q9C0H2 523 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 IPO11Q9UI26 975 aaKnown RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 GGT7Q9UJ14 662 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 ITM2BQ9Y287 266 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 MFHAS1Q9Y4C4 1052 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CSNK1G3Q9Y6M4 447 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 U3KQA8 63 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CHD5Q8TDI0 1954 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 FAM208BQ5VWN6 2430 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 MYLKQ15746 1914 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 RASA4BC9J798 803 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 INSIG1O15503 277 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 RASA4O43374 803 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 OPA1O60313 960 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 MMP20O60882 483 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 NEBLO76041 1014 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 CCDC172P0C7W6 258 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ALPPL2P10696 532 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ATP1A3P13637 1013 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 NME1P15531 152 aaKnown RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 TIMP2P16035 220 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 JUNDP17535 347 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ITIH2P19823 946 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 TNFAIP3P21580 790 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ITPKBP27987 946 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 DUSP3P51452 185 aaPredicted RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 AIF1P55008 147 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 OGDHQ02218 1023 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 RAD51Q06609 339 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 EIF2B5Q13144 721 aaKnown RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 MAMLD1Q13495 774 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 PDE1CQ14123 709 aaPredicted RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 CYTH1Q15438 398 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 EFHC2Q5JST6 749 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 TPRG1LQ5T0D9 272 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 CDCP2Q5VXM1 449 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 DNAJC24Q6P3W2 148 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 DCUN1D2Q6PH85 259 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 KDM7AQ6ZMT4 941 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 PARGQ86W56 976 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ZNF354CQ86Y25 554 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 UMODL1-AS1Q8N2C9 162 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 DENND6BQ8NEG7 585 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ZNF548Q8NEK5 533 aaPredicted RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 FGF11Q92914 225 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ARHGEF26Q96DR7 871 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 HMCESQ96FZ2 354 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 CRELD1Q96HD1 420 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 VCPIP1Q96JH7 1222 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 MCEEQ96PE7 176 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 SYT11Q9BT88 431 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 CPEB1Q9BZB8 566 aaKnown RBP7.72□□□□□ -1.17
CUX1-219ENST00000606749 CATSPERBQ9H7T0 1116 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 USP29Q9HBJ7 922 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 TAS2R14Q9NYV8 317 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 DKK3Q9UBP4 350 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 CACNA1GO43497 2377 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 ACACAQ13085 2346 aa7.72□□□□□ -1.17
CUX1-219ENST00000606749 APC2O95996 2303 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 H3BM21 787 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 J3KR12 359 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 TPP1O14773 563 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms