RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SDC3O75056 442 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 POP4O95707 220 aaKnown RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 TPM3P06753 285 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 CD48P09326 243 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 ATXN1LP0C7T5 689 aaKnown RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 C1QTNF9P0C862 333 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 EPHA8P29322 1005 aaPredicted RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 GJC1P36383 396 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 BNIP3Q12983 259 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 PIGHQ14442 188 aaPredicted RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 STAT4Q14765 748 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 INO80DQ53TQ3 878 aaPredicted RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 GDPD4Q6W3E5 623 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 POLNQ7Z5Q5 900 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 SLCO6A1Q86UG4 719 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 ZSWIM9Q86XI8 627 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 NIPA2Q8N8Q9 360 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 OR13H1Q8NG92 308 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 NSMCE3Q96MG7 304 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 CHP1Q99653 195 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 ABHD10Q9NUJ1 306 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 SPTLC3Q9NUV7 552 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 IP6K2Q9UHH9 426 aa12.46□□□□□ -0.41
CTSA-210ENST00000606000 TPX2Q9ULW0 747 aaKnown RBP12.46□□□□□ -0.41
CTSA-210ENST00000606000 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.42
CTSA-210ENST00000606000 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 ARHGAP42A6NI28 874 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 EIF3CLB5ME19 914 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 H3BRJ5 948 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 MUSKO15146 869 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 MFAP3LO75121 409 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 PAK4O96013 591 aaPredicted RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 PRKCGP05129 697 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 SEMG2Q02383 582 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 ATP13A4Q4VNC1 1196 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 NEK5Q6P3R8 708 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 PSTKQ8IV42 348 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 SLC22A18ASQ8N1D0 253 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 SKA1Q96BD8 255 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 LRIG1Q96JA1 1093 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 EIF3CQ99613 913 aaKnown RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
CTSA-210ENST00000606000 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 OSBPL1AQ9BXW6 950 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 SP110Q9HB58 689 aa12.45□□□□□ -0.42
CTSA-210ENST00000606000 PTPRBP23467 1997 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 POM121BA6NF01 834 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 NEMP1O14524 444 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 AREL1O15033 823 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 AP1G1O43747 822 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 BUB1BO60566 1050 aaPredicted RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 PALMO75781 387 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 TIMP2P16035 220 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 AKT2P31751 481 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 NUDT1P36639 197 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 ARL4AP40617 200 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 GRK6P43250 576 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 HCAR3P49019 387 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 TAS2R40P59535 323 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 RPS21P63220 83 aaKnown RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 HNRNPDQ14103 355 aaKnown RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 TRIM14Q14142 442 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 ACAP1Q15027 740 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 CCDC157Q569K6 752 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 ZNF542PQ5EBM4 170 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 TPRG1LQ5T0D9 272 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 KANSL1Q7Z3B3 1105 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 RAB44Q7Z6P3 723 aaPredicted RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 GLRX5Q86SX6 157 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 IQCHQ86VS3 1027 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 MARCH9Q86YJ5 346 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 EID2Q8N6I1 236 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 TSC1Q92574 1164 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 KLHDC7BQ96G42 594 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 BMFQ96LC9 184 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms