RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 POM121BA6NF01 834 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 IGLON5A6NGN9 336 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 FGF10O15520 208 aaPredicted RBP10.82□□□□□ -0.68
TUBE1-210ENST00000604967 PRPSAP2O60256 369 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 MFAP3LO75121 409 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 CER1O95813 267 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 GIMD1P0DJR0 217 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 HCAR3P49019 387 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 NEK3P51956 506 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 NDST2P52849 883 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 CLDN6P56747 220 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 TPM4P67936 248 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 PTPRRQ15256 657 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 TRIP6Q15654 476 aaKnown RBP10.82□□□□□ -0.68
TUBE1-210ENST00000604967 ZNF805Q5CZA5 627 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 PPP1R2P3Q6NXS1 205 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 PGBD5Q8N414 524 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 MFSD2AQ8NA29 543 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 OR13H1Q8NG92 308 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 HSPH1Q92598 858 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 ELF4Q99607 663 aaPredicted RBP10.82□□□□□ -0.68
TUBE1-210ENST00000604967 SCNM1Q9BWG6 230 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 RBSNQ9H1K0 784 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 CATSPERBQ9H7T0 1116 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 ABHD10Q9NUJ1 306 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.68
TUBE1-210ENST00000604967 SPTLC3Q9NUV7 552 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 KLHL11Q9NVR0 708 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 TFR2Q9UP52 801 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 PCDHGB2Q9Y5G2 931 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 SCINQ9Y6U3 715 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 ARID1BQ8NFD5 2236 aaPredicted RBP10.82□□□□□ -0.68
TUBE1-210ENST00000604967 LAMA5O15230 3695 aa10.82□□□□□ -0.68
TUBE1-210ENST00000604967 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 DFFAO00273 331 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 AP1G1O43747 822 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 PCDHGA12O60330 932 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 SDC3O75056 442 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 RNF8O76064 485 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 POP4O95707 220 aaKnown RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 PAK4O96013 591 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 CAPNS1P04632 268 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 FTH1P19P0C7X4 201 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 C1QTNF9P0C862 333 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 GM2AP17900 193 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 HTR7P34969 479 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 ETFBP38117 255 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 RECQLP46063 649 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 SLC10A7Q0GE19 358 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 TEAD4Q15561 434 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 SLC18A3Q16572 532 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 INO80DQ53TQ3 878 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 KCTD16Q68DU8 428 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 GDPD4Q6W3E5 623 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 RAB44Q7Z6P3 723 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 GLRX5Q86SX6 157 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 CAMK1DQ8IU85 385 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 PSTKQ8IV42 348 aaKnown RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 SLC25A45Q8N413 288 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 RYBPQ8N488 228 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 PCDH19Q8TAB3 1148 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 SETD7Q8WTS6 366 aaKnown RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 GATA6Q92908 595 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 TRIM11Q96F44 468 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 UCKL1Q9NWZ5 548 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 UBA2Q9UBT2 640 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-210ENST00000604967 KLF15Q9UIH9 416 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 ANGPTL2Q9UKU9 493 aa10.81□□□□□ -0.68
TUBE1-210ENST00000604967 PLXNB3Q9ULL4 1909 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 TSPAN11A1L157 253 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ZSCAN5CA6NGD5 496 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 TRIM38O00635 465 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 MAFKO60675 156 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 MMP20O60882 483 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 PCDH8O95206 1070 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 MAP3K6O95382 1288 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 EPHA8P29322 1005 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 C21orf59P57076 290 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 RHOAP61586 193 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 SNRPD1P62314 119 aaKnown RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 SFSWAPQ12872 951 aaKnown RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 DPYSL3Q14195 570 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 PIGHQ14442 188 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 SETMARQ53H47 684 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ZNF542PQ5EBM4 170 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 NEK5Q6P3R8 708 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 FBXL19Q6PCT2 694 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ADAT2Q7Z6V5 191 aaKnown RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ABI3BPQ7Z7G0 1075 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 PRPF39Q86UA1 669 aaKnown RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ZNF354CQ86Y25 554 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 PQLC3Q8N755 202 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 TC2NQ8N9U0 490 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 ZNF564Q8TBZ8 553 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-210ENST00000604967 CENPTQ96BT3 561 aa10.8□□□□□ -0.68
TUBE1-210ENST00000604967 IQCDQ96DY2 449 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms