RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 PRRT3Q5FWE3 981 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 ZDHHC17Q8IUH5 632 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 CENPTQ96BT3 561 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 ZYG11BQ9C0D3 744 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 MBNL1Q9NR56 388 aaKnown RBP17.11■□□□□ 0.33
CCDC12-210ENST00000604181 APOBEC3BQ9UH17 382 aaKnown RBP17.11■□□□□ 0.33
CCDC12-210ENST00000604181 RABGEF1Q9UJ41 708 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 TMEM59LQ9UK28 342 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
CCDC12-210ENST00000604181 LRRK1Q38SD2 2015 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 GOLGA8SH3BPF8 625 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 TPP1O14773 563 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 F9P00740 461 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 SLC20A2Q08357 652 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 SRSF6Q13247 344 aaKnown RBP17.1■□□□□ 0.33
CCDC12-210ENST00000604181 SGCGQ13326 291 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 MANEALQ5VSG8 457 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 TAF3Q5VWG9 929 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 B3GNT8Q7Z7M8 397 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 CLEC14AQ86T13 490 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 VPS36Q86VN1 386 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 IL12RB2Q99665 862 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 EVA1BQ9NVM1 165 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 RWDD2AQ9UIY3 292 aa17.1■□□□□ 0.33
CCDC12-210ENST00000604181 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 FAM72CH0Y354 149 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 AREL1O15033 823 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 YY2O15391 372 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 TSPAN6O43657 245 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 TNFSF15O95150 251 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
CCDC12-210ENST00000604181 UGT2B4P06133 528 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 SCNN1AP37088 669 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 TCEA2Q15560 299 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 ZNF805Q5CZA5 627 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 C6orf132Q5T0Z8 1188 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 ATXN7L2Q5T6C5 722 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-210ENST00000604181 FAM72AQ5TYM5 149 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 FAM72DQ6L9T8 149 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 FAM72BQ86X60 149 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 RYBPQ8N488 228 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-210ENST00000604181 EMC1Q8N766 993 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 DENND6BQ8NEG7 585 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 ASB12Q8WXK4 309 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 ARHGEF2Q92974 986 aaKnown RBP17.09■□□□□ 0.33
CCDC12-210ENST00000604181 ISG20Q96AZ6 181 aaKnown RBP17.09■□□□□ 0.33
CCDC12-210ENST00000604181 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
CCDC12-210ENST00000604181 LMO7DNF2Z398 122 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 KRIT1O00522 736 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-210ENST00000604181 NEMP1O14524 444 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 MMP20O60882 483 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 TCEA3O75764 348 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 CYP11B1P15538 503 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 TSHRP16473 764 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 SNX16P57768 344 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 ATP11AP98196 1134 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 KCTD16Q68DU8 428 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 PLPP6Q8IY26 295 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 EXD3Q8N9H8 876 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-210ENST00000604181 TPCN2Q8NHX9 752 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 WDR36Q8NI36 951 aaKnown RBP17.08■□□□□ 0.32
CCDC12-210ENST00000604181 MED8Q96G25 268 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 KLHL32Q96NJ5 620 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 SYNDIG1Q9H7V2 258 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 NCKIPSDQ9NZQ3 722 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.32
CCDC12-210ENST00000604181 DNAI1Q9UI46 699 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 PAXBP1Q9Y5B6 917 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 FHOD1Q9Y613 1164 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 SCN8AQ9UQD0 1980 aa17.08■□□□□ 0.32
CCDC12-210ENST00000604181 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
CCDC12-210ENST00000604181 TGIF1Q15583 401 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 C15orf59Q2T9L4 293 aaPredicted RBP17.07■□□□□ 0.32
CCDC12-210ENST00000604181 MYLK3Q32MK0 819 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 PHLDB2Q86SQ0 1253 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 NOP9Q86U38 636 aaKnown RBP17.07■□□□□ 0.32
CCDC12-210ENST00000604181 KYQ8NBH2 561 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 OR2AP1Q8NGE2 309 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 BTN2A2Q8WVV5 523 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 CPA5Q8WXQ8 436 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 RAB7BQ96AH8 199 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 GRAMD1AQ96CP6 724 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 KLC2Q9H0B6 622 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 METTL5Q9NRN9 209 aaKnown RBP17.07■□□□□ 0.32
CCDC12-210ENST00000604181 PADI4Q9UM07 663 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 LRP4O75096 1905 aa17.07■□□□□ 0.32
CCDC12-210ENST00000604181 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
CCDC12-210ENST00000604181 GJB6O95452 261 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms