RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 BUD23O43709 281 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PHF2O75151 1096 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PPP6R2O75170 966 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CIB2O75838 187 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TNFAIP8O95379 198 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ALBP02768 609 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ALOX5P09917 674 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ODC1P11926 461 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CCDC130P13994 396 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 NCF1P14598 390 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ARF4P18085 180 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 RPA1P27694 616 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PKLRP30613 574 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRIM23P36406 574 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 AQP4P55087 323 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PRAMEP78395 509 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 RHAGQ02094 409 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 NCF4Q15080 339 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PLCL1Q15111 1095 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PFKFB3Q16875 520 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 LRRC36Q1X8D7 754 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TAF1BQ53T94 588 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 HP1BP3Q5SSJ5 553 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 NT5DC1Q5TFE4 455 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC25A24Q6NUK1 477 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FDX2Q6P4F2 183 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRIM72Q6ZMU5 477 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 GPR142Q7Z601 462 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ADAMTSL2Q86TH1 951 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TSPYL5Q86VY4 417 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 LRRC6Q86X45 466 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CLIP4Q8N3C7 705 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MINDY1Q8N5J2 469 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 GPR156Q8NFN8 814 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 OR10Z1Q8NGY1 313 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC35G2Q8TBE7 412 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PHOSPHO2Q8TCD6 241 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ADAMTS16Q8TE57 1224 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KBTBD7Q8WVZ9 684 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ESR2Q92731 530 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF274Q96GC6 653 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FUBP3Q96I24 572 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SERPINB12Q96P63 405 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KCNC2Q96PR1 638 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KLC2Q9H0B6 622 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 C2orf40Q9H1Z8 148 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 OR10A4Q9H209 315 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KCNK9Q9NPC2 374 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SNTG1Q9NSN8 517 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SOHLH2Q9NX45 425 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 IL37Q9NZH6 218 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ANKMY1Q9P2S6 941 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 USP21Q9UK80 565 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ERGIC3Q9Y282 383 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 A4D1N5 150 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ARHGEF35A5YM69 484 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FAM86C2PA6NEL3 165 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRIM77I1YAP6 450 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC9A3R1O14745 358 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SYN3O14994 580 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A9O60656 530 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLITRK3O94933 977 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 LTFP02788 710 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 QDPRP09417 244 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DBTP11182 482 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A6P19224 532 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A1P22309 533 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A4P22310 534 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CASP1P29466 404 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A3P35503 534 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A5P35504 534 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 NR4A2P43354 598 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLCO1A2P46721 670 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 INSM1Q01101 510 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRAP1Q12931 704 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DMC1Q14565 340 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PTPAQ15257 358 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FAM187BQ17R55 369 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SMTNL2Q2TAL5 461 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FAM209BQ5JX69 171 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FAM26FQ5R3K3 315 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 HGSNATQ68CP4 663 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 G2E3Q7L622 706 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CMTR1Q8N1G2 835 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 OR52K1Q8NGK4 314 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SCFD1Q8WVM8 642 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CCDC74BQ96LY2 380 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MAGEB18Q96M61 343 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FMO2Q99518 471 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 HOXD1Q9GZZ0 328 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 Q9H521 79 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 NOL6Q9H6R4 1146 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A7Q9HAW7 530 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms