RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CHRNDQ07001 517 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SMARCB1Q12824 385 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GRSF1Q12849 480 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MAMLD1Q13495 774 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 HERC3Q15034 1050 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNA10Q16322 511 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CCDC157Q569K6 752 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF628Q5EBL2 1059 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TOR1AIP1Q5JTV8 583 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CLVS2Q5SYC1 327 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM69AQ5T7M9 428 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RNASEH2BQ5TBB1 312 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DCAF15Q66K64 600 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 INTS5Q6P9B9 1019 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF704Q6ZNC4 412 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MRPL10Q7Z7H8 261 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ZZZ3Q8IYH5 903 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 OXR1Q8N573 874 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CISD2Q8N5K1 135 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 AOPEPQ8N6M6 819 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 STK35Q8TDR2 534 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 WASF1Q92558 559 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GAL3ST3Q96A11 431 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 METTL2AQ96IZ6 378 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NECAB3Q96P71 396 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CCDC77Q9BR77 488 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PIMREGQ9BSJ6 248 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CALN1Q9BXU9 219 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RNPEPQ9H4A4 650 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CCDC86Q9H6F5 360 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TDRKHQ9Y2W6 561 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DYRK1BQ9Y463 629 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PCDHA10Q9Y5I2 948 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RNF103-CHMP3A0A140T963 221 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 B8ZZF3 427 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 RNF103O00237 685 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 FCHO1O14526 889 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 DVL2O14641 736 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNK3O14649 394 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 STX10O60499 249 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 TOMM70O94826 608 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ARHGEF15O94989 841 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CLPTM1O96005 669 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ITGB1P05556 798 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 BRAFP15056 766 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC9A1P19634 815 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PRCPP42785 496 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC1A1P43005 524 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 LSSP48449 732 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PCYT1AP49585 367 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 RTP1P59025 263 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 TNFRSF17Q02223 184 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 NCF4Q15080 339 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PRAMEF14Q5SWL7 426 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 C12orf60Q5U649 245 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ATG16L1Q676U5 607 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SPOPLQ6IQ16 392 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 KIAA1841Q6NSI8 718 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 METTL2BQ6P1Q9 378 aaKnown RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM122CQ6P4D5 195 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 C4orf22Q6V702 233 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CCNI2Q6ZMN8 369 aaPredicted RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP4V2Q6ZWL3 525 aaPredicted RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CCDC25Q86WR0 208 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 TMEM139Q8IV31 216 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 DIS3L2Q8IYB7 885 aaKnown RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PHACTR4Q8IZ21 702 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ELMOD1Q8N336 334 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 USHBP1Q8N6Y0 703 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 DNAJC5GQ8N7S2 189 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC13A3Q8WWT9 602 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 HES6Q96HZ4 224 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF333Q96JL9 665 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 COX4I2Q96KJ9 171 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PANX2Q96RD6 677 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 INTS14Q96SY0 518 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SECISBP2Q96T21 854 aaKnown RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 HTATIP2Q9BUP3 242 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 MRPL1Q9BYD6 325 aaKnown RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC5A7Q9GZV3 580 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 ERVMER34-1Q9H9K5 563 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP26B1Q9NR63 512 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 GDAP2Q9NXN4 497 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 IPO11Q9UI26 975 aaKnown RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 CYTH4Q9UIA0 394 aa5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 FAF1Q9UNN5 650 aaPredicted RBP5.09□□□□□ -1.59
SPTBN1-206ENST00000602898 PDE2AO00408 941 aaPredicted RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 TRDMT1O14717 391 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 PFDN6O15212 129 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 PPP6R2O75170 966 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 HTR3BO95264 441 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CHEK2O96017 543 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 EEF1DP29692 281 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 AXLP30530 894 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 RAD23BP54727 409 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 RPS3AP61247 264 aaKnown RBP5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 CAP1Q01518 475 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 OCRLQ01968 901 aa5.09□□□□□ -1.6
SPTBN1-206ENST00000602898 IRF3Q14653 427 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms