RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NOMO1Q15155 1222 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 ZNF569Q5MCW4 686 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SEL1L2Q5TEA6 688 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 PMS2CLQ68D20 193 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 LAIR1Q6GTX8 287 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 ERN2Q76MJ5 926 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 PGBD5Q8N414 524 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 OR6K2Q8NGY2 324 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 ACTL9Q8TC94 416 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 FOXJ1Q92949 421 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 NKD2Q969F2 451 aaPredicted RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 RAB7BQ96AH8 199 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 ZNF419Q96HQ0 510 aaPredicted RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 EXOC2Q96KP1 924 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.16
RNF40-212ENST00000602784 POLR1EQ9GZS1 481 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 ATP13A3Q9H7F0 1226 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SERGEFQ9UGK8 458 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 TPX2Q9ULW0 747 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 SMG5Q9UPR3 1016 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 ABCA7Q8IZY2 2146 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 LRRC72A6NJI9 287 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 C16orf96A6NNT2 1141 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 C10orf142B7Z368 130 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 KCNK1O00180 336 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 RNF103O00237 685 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 INSIG1O15503 277 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 NEBLO76041 1014 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 SEMA4FO95754 770 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 JCHAINP01591 159 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 UGT2B4P06133 528 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 SERPINA4P29622 427 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 GKP32189 559 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 ACSL1P33121 698 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 OTUD4Q01804 1114 aaKnown RBP14.04□□□□□ -0.16
RNF40-212ENST00000602784 SLC45A4Q5BKX6 768 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 NEK5Q6P3R8 708 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 NCEH1Q6PIU2 408 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 BRAT1Q6PJG6 821 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 FAM124AQ86V42 546 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 ZC3H18Q86VM9 953 aaKnown RBP14.04□□□□□ -0.16
RNF40-212ENST00000602784 SLC13A5Q86YT5 568 aaPredicted RBP14.04□□□□□ -0.16
RNF40-212ENST00000602784 OR2T34Q8NGX1 318 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 ARRDC3Q96B67 414 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 VAT1Q99536 393 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 FERMT1Q9BQL6 677 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 GPR174Q9BXC1 333 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 FRMD8P1Q9BZ68 369 aaPredicted RBP14.04□□□□□ -0.16
RNF40-212ENST00000602784 SUV39H2Q9H5I1 410 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 ATP8A1Q9Y2Q0 1164 aa14.04□□□□□ -0.16
RNF40-212ENST00000602784 GPR179Q6PRD1 2367 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 ZFHX2Q9C0A1 2572 aaPredicted RBP14.03□□□□□ -0.16
RNF40-212ENST00000602784 A0A1W2PQ67 120 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 TSPAN11A1L157 253 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 BCLAF3A2AJT9 711 aaKnown RBP14.03□□□□□ -0.16
RNF40-212ENST00000602784 PLRG1O43660 514 aaKnown RBP14.03□□□□□ -0.16
RNF40-212ENST00000602784 AP1G1O43747 822 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 SOCS5O75159 536 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 ADRB3P13945 408 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 DPP6P42658 865 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 CCR5P51681 352 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 NEK3P51956 506 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 ADPRHP54922 357 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 EIF3EP60228 445 aaKnown RBP14.03□□□□□ -0.16
RNF40-212ENST00000602784 BCL2L1Q07817 233 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 POM121L1PQ3SYA9 428 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 TEX44Q53QW1 395 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 HS1BP3Q53T59 392 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 FBXL19Q6PCT2 694 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 CNTD1Q8N815 330 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 HAUS1Q96CS2 278 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 ECHDC3Q96DC8 303 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 KLHL32Q96NJ5 620 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 SEMA3CQ99985 751 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 NOD2Q9HC29 1040 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 PREBQ9HCU5 417 aa14.03□□□□□ -0.16
RNF40-212ENST00000602784 WDR87Q6ZQQ6 2873 aa14.02□□□□□ -0.16
RNF40-212ENST00000602784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 METTL12A8MUP2 240 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 H7C0C1 242 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 TRAFD1O14545 582 aaPredicted RBP14.02□□□□□ -0.17
RNF40-212ENST00000602784 HTRA2O43464 458 aaPredicted RBP14.02□□□□□ -0.17
RNF40-212ENST00000602784 HLA-DQB2P05538 268 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 RETP07949 1114 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 RBP3P10745 1247 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 PTPN3P26045 913 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 HOXD12P35452 270 aa14.02□□□□□ -0.17
RNF40-212ENST00000602784 ATP5OP48047 213 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms