RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SLCO1B7G3V0H7 640 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 RNASEH1O60930 286 aaKnown RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 TCEA3O75764 348 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 MPOP05164 745 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 IL18Q14116 193 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 TMC7Q7Z402 723 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 WDR49Q8IV35 697 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 MINDY2Q8NBR6 621 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 TOP1MTQ969P6 601 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 TMEM169Q96HH4 297 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 GMCL1Q96IK5 515 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 FRMD6Q96NE9 622 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 MTIF3Q9H2K0 278 aaKnown RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 XPNPEP3Q9NQH7 507 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 DNAJC11Q9NVH1 559 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 RAD54BQ9Y620 910 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 GSC2O15499 205 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 RECQL5O94762 991 aaPredicted RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 TKTL1P51854 596 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 BOP1Q14137 746 aaKnown RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 RFX4Q33E94 735 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 KHDC1Q4VXA5 237 aaKnown RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 LACTB2Q53H82 288 aaPredicted RBP8.77□□□□□ -1
CSMD1-216ENST00000602557 COQ3Q9NZJ6 369 aa8.77□□□□□ -1
CSMD1-216ENST00000602557 RIMS1Q86UR5 1692 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 FAM240BA0A1B0GVZ2 78 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CES2O00748 559 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CD151P48509 253 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 LIN54Q6MZP7 749 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MACC1Q6ZN28 852 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 PQLC1Q8N2U9 271 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MREGQ8N565 214 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 LPCAT1Q8NF37 534 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 TMEM176AQ96HP8 235 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CPNE1Q99829 537 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 EMILIN2Q9BXX0 1053 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 UGT2B28Q9BY64 529 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 NKX1-2Q9UD57 310 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ARHGEF28Q8N1W1 1705 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CELF2O95319 508 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 OLR1P78380 273 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 TGM3Q08188 693 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CCNG2Q16589 344 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 FBXO39Q8N4B4 442 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ZCCHC9Q8N567 271 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 AAASQ9NRG9 546 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 OR6B1O95007 311 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MGAT1P26572 445 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CCR1P32246 355 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MAN2A2P49641 1150 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 COLEC12Q5KU26 742 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 AKAP1Q92667 903 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CHIAQ9BZP6 476 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 VPS4AQ9UN37 437 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 PRAMEF33A0A0G2JMD5 474 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 DHRS12A0PJE2 317 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 PRAMEF10O60809 474 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 NPR2P20594 1047 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ABRAQ8N0Z2 381 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 GJD4Q96KN9 370 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 TBL1YQ9BQ87 522 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 RPH3AQ9Y2J0 694 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 NCAM2O15394 837 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MSL3P1P0C860 447 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 RCVRNP35243 200 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CD83Q01151 205 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ARSHQ5FYA8 562 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF720Q7Z2F6 126 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ANKRD23Q86SG2 305 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 APBB2Q92870 758 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 NPAS2Q99743 824 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 VTI1BQ9UEU0 232 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 KIAA1257Q9ULG3 409 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 PRR5-ARHGAP8B1AHC4 643 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 FAM47E-STBD1D6RA91 191 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 KPNA6O60684 536 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MT-ND1P03886 318 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CKBP12277 381 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ARHGAP8P85298 464 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ECT2LQ008S8 904 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 AGO4Q9HCK5 861 aaKnown RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MALT1Q9UDY8 824 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 DEPDC5O75140 1603 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 NWD1Q149M9 1564 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 C12orf71A8MTZ7 269 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 DYRK3O43781 588 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms