RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	PHACTR4	Q8IZ21	702 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	NAT6	Q93015	286 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	RAB7B	Q96AH8	199 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	TBCB	Q99426	244 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	CRACR2A	Q9BSW2	395 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	APEX2	Q9UBZ4	518 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	APOBEC3B	Q9UH17	382 aa	Known RBP	13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	IPO11	Q9UI26	975 aa	Known RBP	13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	CTNND2	Q9UQB3	1225 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	SDK2	Q58EX2	2172 aa		13.62	□□□□□ -0.23
TIMM50-219	ENST00000602265	BICDL2	A1A5D9	508 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	CELA2B	P08218	269 aa	Predicted RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	TSHR	P16473	764 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	CDH5	P33151	784 aa	Predicted RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	CLCN1	P35523	988 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	RPIA	P49247	311 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SULT1E1	P49888	294 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	STX17	P56962	302 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	YPEL5	P62699	121 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	GNA12	Q03113	381 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SRSF6	Q13247	344 aa	Known RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SGCG	Q13326	291 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	ZSCAN23	Q3MJ62	389 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SLC25A52	Q3SY17	297 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	PRRT3	Q5FWE3	981 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	FOXR1	Q6PIV2	292 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	LRRC31	Q6UY01	552 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	ZDHHC17	Q8IUH5	632 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	ISG20	Q96AZ6	181 aa	Known RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	FAM81B	Q96LP2	452 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SPON2	Q9BUD6	331 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SRRT	Q9BXP5	876 aa	Known RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	ATP13A1	Q9HD20	1204 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	SIX2	Q9NPC8	291 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	STARD5	Q9NSY2	213 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	NDFIP2	Q9NV92	336 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	HECA	Q9UBI9	543 aa	Predicted RBP	13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	IL17B	Q9UHF5	180 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265	PADI4	Q9UM07	663 aa		13.61	□□□□□ -0.23
TIMM50-219	ENST00000602265		A0A1W2PQM1	296 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	PLD2	O14939	933 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	F9	P00740	461 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	SLC5A2	P31639	672 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	UGT1A5	P35504	534 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	FLT3	P36888	993 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	USP8	P40818	1118 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	GABRB2	P47870	512 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	DEUP1	Q05D60	604 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	SPIDR	Q14159	915 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	TGIF1	Q15583	401 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	ZNF805	Q5CZA5	627 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	DPY19L2P1	Q6NXN4	242 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	MACC1	Q6ZN28	852 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	SLC47A2	Q86VL8	602 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	OR6K2	Q8NGY2	324 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	GLMN	Q92990	594 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	HAPLN3	Q96S86	360 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	ZYG11B	Q9C0D3	744 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	ZDHHC6	Q9H6R6	413 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	PLCB1	Q9NQ66	1216 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	MBNL1	Q9NR56	388 aa	Known RBP	13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	STAP1	Q9ULZ2	295 aa		13.6	□□□□□ -0.23
TIMM50-219	ENST00000602265	FOXN3	O00409	490 aa	Predicted RBP	13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	SRGAP2	O75044	1071 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PNMA6A	P0CW24	399 aa	Predicted RBP	13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PON1	P27169	355 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	ACVRL1	P37023	503 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	SCNN1A	P37088	669 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	DNA2	P51530	1060 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	THOP1	P52888	689 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	RNASE9	P60153	205 aa	Known RBP	13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PTK2	Q05397	1052 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	NFATC3	Q12968	1075 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	EIF3I	Q13347	325 aa	Known RBP	13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PTK2B	Q14289	1009 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	MANEAL	Q5VSG8	457 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	XKR5	Q6UX68	686 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	NYAP1	Q6ZVC0	841 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	RAB11FIP2	Q7L804	512 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PRICKLE2	Q7Z3G6	844 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	ARHGEF2	Q92974	986 aa	Known RBP	13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	TM6SF2	Q9BZW4	377 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	TMEM59L	Q9UK28	342 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	NEU3	Q9UQ49	428 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	PAXBP1	Q9Y5B6	917 aa		13.59	□□□□□ -0.23
TIMM50-219	ENST00000602265	LRRK2	Q5S007	2527 aa		13.58	□□□□□ -0.23
TIMM50-219	ENST00000602265	GTPBP10	A4D1E9	387 aa	Known RBP	13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265		D6RAR5	112 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	TOR1B	O14657	336 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	GSR	P00390	522 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	ITGB2	P05107	769 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	ANXA6	P08133	673 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	HGF	P14210	728 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	ITIH2	P19823	946 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	CCKBR	P32239	447 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms