RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 WNT9AO14904 365 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 FLRT2O43155 660 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 PCDHGA12O60330 932 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 UGT2B4P06133 528 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 PMLP29590 882 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 MAT2AP31153 395 aaKnown RBP17.43■□□□□ 0.38
HERC3-214ENST00000601319 CCT8P50990 548 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 IL10RBQ08334 325 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
HERC3-214ENST00000601319 GRM3Q14832 879 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 CYTH1Q15438 398 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 HADHQ16836 314 aaKnown RBP17.43■□□□□ 0.38
HERC3-214ENST00000601319 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 GDPD4Q6W3E5 623 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 CCDC42Q96M95 316 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 TRIM5Q9C035 493 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 ERVMER34-1Q9H9K5 563 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 DKK3Q9UBP4 350 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 C16orf96A6NNT2 1141 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 H0Y8X5 98 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 YKT6O15498 198 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 TSPAN6O43657 245 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 MAGEC1O60732 1142 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 MTA2O94776 668 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 GKP32189 559 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 SERPINB6P35237 376 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 CSNK1DP48730 415 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 SUOXP51687 545 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 NXPH1P58417 271 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 RPS21P63220 83 aaKnown RBP17.42■□□□□ 0.38
HERC3-214ENST00000601319 SHC2P98077 582 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 OXR1Q8N573 874 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 BAHD1Q8TBE0 780 aaPredicted RBP17.42■□□□□ 0.38
HERC3-214ENST00000601319 ZNF599Q96NL3 588 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 ELF4Q99607 663 aaPredicted RBP17.42■□□□□ 0.38
HERC3-214ENST00000601319 SP110Q9HB58 689 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
HERC3-214ENST00000601319 ZFR2Q9UPR6 939 aaKnown RBP17.42■□□□□ 0.38
HERC3-214ENST00000601319 ACACBO00763 2458 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 A0A1B0GTQ1 180 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 TSPAN11A1L157 253 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 TLR4O00206 839 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 DFFAO00273 331 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 AREL1O15033 823 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 SPINT1O43278 529 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 SH3BP5O60239 455 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 CBFA2T3O75081 653 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 PCDH8O95206 1070 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 HNRNPA2B1P22626 353 aaKnown RBP17.41■□□□□ 0.38
HERC3-214ENST00000601319 ABL2P42684 1182 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 ARSEP51690 589 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 TMCO4Q5TGY1 634 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 GLRX5Q86SX6 157 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 TC2NQ8N9U0 490 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 FAM174AQ8TBP5 190 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 HCAR2Q8TDS4 363 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 MRFAP1L1Q96HT8 127 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 KLHL32Q96NJ5 620 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 TUBGCP5Q96RT8 1024 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 IPO11Q9UI26 975 aaKnown RBP17.41■□□□□ 0.38
HERC3-214ENST00000601319 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 INTUQ9ULD6 942 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 AKAP13Q12802 2813 aa17.41■□□□□ 0.38
HERC3-214ENST00000601319 PALMO75781 387 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 KRT7P08729 469 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 PRLRP16471 622 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 AMPD1P23109 780 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 AKT2P31751 481 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 CDH6P55285 790 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 KRT81Q14533 505 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 STAT4Q14765 748 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 SUZ12Q15022 739 aaKnown RBP17.4■□□□□ 0.38
HERC3-214ENST00000601319 TCEAL1Q15170 157 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 INAVAQ3KP66 663 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 SEL1L3Q68CR1 1132 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 ASB12Q8WXK4 309 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 RFFLQ8WZ73 363 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 FEM1CQ96JP0 617 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
HERC3-214ENST00000601319 PSKH2Q96QS6 385 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 ZNF670Q9BS34 389 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 ETNK2Q9NVF9 386 aa17.4■□□□□ 0.38
HERC3-214ENST00000601319 FRYQ5TBA9 3013 aa17.39■□□□□ 0.38
HERC3-214ENST00000601319 PTPRBP23467 1997 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 IL4RP24394 825 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 ARHGAP25P42331 645 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 GRK6P43250 576 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 SSR1P43307 286 aaKnown RBP17.39■□□□□ 0.37
HERC3-214ENST00000601319 ARRB1P49407 418 aaPredicted RBP17.39■□□□□ 0.37
HERC3-214ENST00000601319 SIM1P81133 766 aaPredicted RBP17.39■□□□□ 0.37
HERC3-214ENST00000601319 NSUN2Q08J23 767 aaKnown RBP eCLIP17.39■□□□□ 0.37
HERC3-214ENST00000601319 DPYSL3Q14195 570 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 PDK2Q15119 407 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 ARHGAP36Q6ZRI8 547 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 TSEN2Q8NCE0 465 aaKnown RBP17.39■□□□□ 0.37
HERC3-214ENST00000601319 DENND6BQ8NEG7 585 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms