RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	SEL1L3	Q68CR1	1132 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	GDPD4	Q6W3E5	623 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	H2AFV	Q71UI9	128 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	IQCH	Q86VS3	1027 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CPNE8	Q86YQ8	564 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	TP53INP2	Q8IXH6	220 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	TMEM145	Q8NBT3	493 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	EXOC2	Q96KP1	924 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	KLHL32	Q96NJ5	620 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CSPG4P5	Q96PW8	444 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	ELF4	Q99607	663 aa	Predicted RBP	15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	DEF6	Q9H4E7	631 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	PCDH18	Q9HCL0	1135 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	ETNK2	Q9NVF9	386 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CTTNBP2NL	Q9P2B4	639 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	UVRAG	Q9P2Y5	699 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	PCOLCE2	Q9UKZ9	415 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	WASF3	Q9UPY6	502 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CA5B	Q9Y2D0	317 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	TDRD6	O60522	2096 aa	Known RBP	15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	DFFA	O00273	331 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	INSIG1	O15503	277 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	SPINT1	O43278	529 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	AKR1B10	O60218	316 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	PCDHGA12	O60330	932 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	AMPD1	P23109	780 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	IL9R	Q01113	521 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	RAD51	Q06609	339 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	OVGP1	Q12889	678 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	STAT4	Q14765	748 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	SHB	Q15464	509 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	TSR1	Q2NL82	804 aa	Known RBP	15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	PRAMEF14	Q5SWL7	426 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	KIAA1161	Q6NSJ0	714 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	ARHGAP36	Q6ZRI8	547 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	SPATS2	Q86XZ4	545 aa	Known RBP	15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	LZTR1	Q8N653	840 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	BAHD1	Q8TBE0	780 aa	Predicted RBP	15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	SETD7	Q8WTS6	366 aa	Known RBP	15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	TSC1	Q92574	1164 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	RAB7B	Q96AH8	199 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	MYOC	Q99972	504 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	CPEB1	Q9BZB8	566 aa	Known RBP	15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	FZD3	Q9NPG1	666 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	GDF3	Q9NR23	364 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	ANGPTL2	Q9UKU9	493 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	ITM2B	Q9Y287	266 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	BTBD3	Q9Y2F9	522 aa		15.69	■□□□□ 0.1
PLD3-223	ENST00000600948	CEP295	Q9C0D2	2601 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	AREL1	O15033	823 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	PROSC	O94903	275 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	TMEM253	P0C7T8	217 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	HNRNPA2B1	P22626	353 aa	Known RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	RGR	P47804	291 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	RPS21	P63220	83 aa	Known RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	IL10RB	Q08334	325 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	FOXC1	Q12948	553 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	FGL2	Q14314	439 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	SUZ12	Q15022	739 aa	Known RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	TRIP6	Q15654	476 aa	Known RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	CNGA4	Q8IV77	575 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	FAM71B	Q8TC56	605 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	FEM1C	Q96JP0	617 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	SLC17A9	Q9BYT1	436 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	TRIM5	Q9C035	493 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	ERVMER34-1	Q9H9K5	563 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	SP110	Q9HB58	689 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	SPTLC3	Q9NUV7	552 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	DKK3	Q9UBP4	350 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	IPO11	Q9UI26	975 aa	Known RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	GGT7	Q9UJ14	662 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	PCDHB9	Q9Y5E1	797 aa		15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	COL5A1	P20908	1838 aa	Predicted RBP	15.68	■□□□□ 0.1
PLD3-223	ENST00000600948	AKR1B15	C9JRZ8	316 aa	Predicted RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	TSPAN6	O43657	245 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	MAGEC1	O60732	1142 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	PALM	O75781	387 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	PIGN	O95427	931 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	TOP3B	O95985	862 aa	Known RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	IL4R	P24394	825 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	AKT2	P31751	481 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	SSR1	P43307	286 aa	Known RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	ARSE	P51690	589 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	CDH6	P55285	790 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	HADH	Q16836	314 aa	Known RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	ATP13A4	Q4VNC1	1196 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	LRRC73	Q5JTD7	316 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	TMCO3	Q6UWJ1	677 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	GCNT7	Q6ZNI0	430 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	GLRX5	Q86SX6	157 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	ZSCAN30	Q86W11	494 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	TSEN2	Q8NCE0	465 aa	Known RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	KLHDC7B	Q96G42	594 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	CCDC42	Q96M95	316 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	C1QTNF2	Q9BXJ5	285 aa		15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	RCOR3	Q9P2K3	495 aa	Predicted RBP	15.67	■□□□□ 0.1
PLD3-223	ENST00000600948	MAP1B	P46821	2468 aa	Known RBP	15.66	■□□□□ 0.1
PLD3-223	ENST00000600948	TSPAN11	A1L157	253 aa		15.66	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms