RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CARD16Q5EG05 197 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 C9orf64Q5T6V5 341 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 Q6ZS52 159 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 SIX5Q8N196 739 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 BBS5Q8N3I7 341 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 IL17RCQ8NAC3 791 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 CCHCR1Q8TD31 782 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 SMIM14Q96QK8 99 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 FOXQ1Q9C009 403 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 WHRNQ9P202 907 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 WNT16Q9UBV4 365 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 RNF40O75150 1001 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 ZNF189O75820 626 aaPredicted RBP23.2■■□□□ 1.3
IRF3-227ENST00000600911 GSRP00390 522 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 AGTP01019 485 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 ADRA1AP35348 466 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 CHRNA4P43681 627 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 METAP1P53582 386 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 DRG2P55039 364 aaKnown RBP23.2■■□□□ 1.3
IRF3-227ENST00000600911 PLTPP55058 493 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 ST8SIA6P61647 398 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 HNRNPA1L2Q32P51 320 aaKnown RBP23.2■■□□□ 1.3
IRF3-227ENST00000600911 SERPINA13PQ6UXR4 307 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 CAMK1DQ8IU85 385 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 IPMKQ8NFU5 416 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 UCMAQ8WVF2 138 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 ART4Q93070 314 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 LRRC45Q96CN5 670 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 PARD6BQ9BYG5 372 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 WASF2Q9Y6W5 498 aa23.2■■□□□ 1.3
IRF3-227ENST00000600911 AP2A1O95782 977 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PDHA1P08559 390 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 CHRNB1P11230 501 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 COL9A1P20849 921 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 HSPA9P38646 679 aaKnown RBP23.19■■□□□ 1.3
IRF3-227ENST00000600911 WNT3AP56704 352 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PTPRRQ15256 657 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PREPLQ4J6C6 727 aaPredicted RBP23.19■■□□□ 1.3
IRF3-227ENST00000600911 KIAA1211LQ6NV74 962 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 ZSWIM9Q86XI8 627 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PPIL6Q8IXY8 311 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 STK40Q8N2I9 435 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 AGGF1Q8N302 714 aaeCLIP23.19■■□□□ 1.3
IRF3-227ENST00000600911 RYBPQ8N488 228 aaPredicted RBP23.19■■□□□ 1.3
IRF3-227ENST00000600911 GDAP1L1Q96MZ0 367 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 FICDQ9BVA6 458 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 FAM153AQ9UHL3 310 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 FBXL21Q9UKT6 434 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 NFU1Q9UMS0 254 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 BANF1O75531 89 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 IGSF6O95976 241 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PRLP01236 227 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 STARD6P59095 220 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 SNRPD1P62314 119 aaKnown RBP23.19■■□□□ 1.3
IRF3-227ENST00000600911 MYLK3Q32MK0 819 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 DENND5AQ6IQ26 1287 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 C4orf22Q6V702 233 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.19■■□□□ 1.38e-8■■■□□ 16.6
IRF3-227ENST00000600911 CHPFQ8IZ52 775 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 KDM1BQ8NB78 822 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 MSANTD3Q96H12 275 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 TRIB3Q96RU7 358 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 ZDHHC6Q9H6R6 413 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 PRSS16Q9NQE7 514 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 C2orf42Q9NWW7 574 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 ANAPC5Q9UJX4 755 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 SARDHQ9UL12 918 aa23.19■■□□□ 1.3
IRF3-227ENST00000600911 AVILO75366 819 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 KLF8O95600 359 aaPredicted RBP23.18■■□□□ 1.3
IRF3-227ENST00000600911 EPHX1P07099 455 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 ITIH2P19823 946 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 TPSB2P20231 275 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 NNMTP40261 264 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 CSNK1DP48730 415 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 PRKCQQ04759 706 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 TPSAB1Q15661 275 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 MSS51Q4VC12 460 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 CCDC70Q6NSX1 233 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 ZNF852Q6ZMS4 543 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 METTL3Q86U44 580 aaKnown RBP23.18■■□□□ 1.3
IRF3-227ENST00000600911 CAND1Q86VP6 1230 aaKnown RBP23.18■■□□□ 1.3
IRF3-227ENST00000600911 TXNDC5Q8NBS9 432 aaKnown RBP23.18■■□□□ 1.3
IRF3-227ENST00000600911 RPLP0P6Q8NHW5 317 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 GRIN3AQ8TCU5 1115 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 EXOC4Q96A65 974 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 FAM129BQ96TA1 746 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 TDRD1Q9BXT4 1180 aaKnown RBP23.18■■□□□ 1.3
IRF3-227ENST00000600911 FAM114A2Q9NRY5 505 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 CHKBQ9Y259 395 aa23.18■■□□□ 1.3
IRF3-227ENST00000600911 TRAFD1O14545 582 aaPredicted RBP23.17■■□□□ 1.3
IRF3-227ENST00000600911 FAM153BP0C7A2 387 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 ATXN1LP0C7T5 689 aaKnown RBP23.17■■□□□ 1.3
IRF3-227ENST00000600911 GEMP55040 296 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 GAS6Q14393 721 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 FAM153CQ494X1 144 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 FNBP1LQ5T0N5 605 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 GPR161Q8N6U8 529 aaKnown RBP23.17■■□□□ 1.3
IRF3-227ENST00000600911 OR52K1Q8NGK4 314 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 CD248Q9HCU0 757 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 LTB4R2Q9NPC1 389 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms