RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 STK25O00506 426 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
UPF1-211ENST00000600868 PSMD3O43242 534 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 BNIP3LO60238 219 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 GJB3O75712 270 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 ANXA9O76027 345 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 SERPINF2P08697 491 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 HOXB2P14652 356 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 IVDP26440 423 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 ADCY8P40145 1251 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 CD86P42081 329 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 VPS41P49754 854 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 GEMP55040 296 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 MRPS25P82663 173 aaKnown RBP14.52□□□□□ -0.09
UPF1-211ENST00000600868 MPP3Q13368 585 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 SEMA5AQ13591 1074 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 IHHQ14623 411 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 STARD3Q14849 445 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 CCDC70Q6NSX1 233 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 STK40Q8N2I9 435 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 RYBPQ8N488 228 aaPredicted RBP14.52□□□□□ -0.09
UPF1-211ENST00000600868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.09
UPF1-211ENST00000600868 CHST14Q8NCH0 376 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 SPATA22Q8NHS9 363 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 OXNAD1Q96HP4 312 aaPredicted RBP14.52□□□□□ -0.09
UPF1-211ENST00000600868 NSMCE3Q96MG7 304 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 RBM15Q96T37 977 aaKnown RBP eCLIP14.52□□□□□ -0.09
UPF1-211ENST00000600868 FAM129BQ96TA1 746 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 CHRDQ9H2X0 955 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 MFSD1Q9H3U5 465 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 ATP13A3Q9H7F0 1226 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 CD248Q9HCU0 757 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.09
UPF1-211ENST00000600868 UTP11Q9Y3A2 253 aaKnown RBP14.52□□□□□ -0.09
UPF1-211ENST00000600868 ATG2BQ96BY7 2078 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 A0A1W2PQF6 199 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 ERI2A8K979 691 aaKnown RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 SOCS5O75159 536 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 MT-CYBP00156 380 aaPredicted RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 PRNPP04156 253 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 C7P10643 843 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 MAGEA6P43360 314 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 MAGEA9P43362 315 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 DRG2P55039 364 aaKnown RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 GAS6Q14393 721 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 KCTD19Q17RG1 926 aaPredicted RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 DUPD1Q68J44 220 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 KCTD11Q693B1 232 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 CWF19L1Q69YN2 538 aaKnown RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 PKN3Q6P5Z2 889 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 KDELC1Q6UW63 502 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 Q6ZS52 159 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 SYT13Q7L8C5 426 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 DSG4Q86SJ6 1040 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 TMIEQ8NEW7 156 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 OR6K2Q8NGY2 324 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 OR2T3Q8NH03 318 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 ZNF641Q96N77 438 aaPredicted RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 IER2Q9BTL4 223 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 MLPHQ9BV36 600 aaPredicted RBP14.51□□□□□ -0.09
UPF1-211ENST00000600868 OSBPL1AQ9BXW6 950 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 ZDHHC6Q9H6R6 413 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 IL36AQ9UHA7 158 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 PPM1HQ9ULR3 514 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 WASF2Q9Y6W5 498 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 BDP1A6H8Y1 2624 aa14.51□□□□□ -0.09
UPF1-211ENST00000600868 TMEM221A6NGB7 291 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 BHMG1C9JSJ3 638 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 E7EVH7 732 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 F5H423 210 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 M0R296 226 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 TRAFD1O14545 582 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 DNALI1O14645 258 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 NDC80O14777 642 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 HTRA2O43464 458 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 LEFTY1O75610 366 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 HEXIM1O94992 359 aaKnown RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 AP2A1O95782 977 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 EPOP01588 193 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 CTSLP07711 333 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 CA4P22748 312 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 SERPINA4P29622 427 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 GKP32189 559 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 WNT3AP56704 352 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 SLC7A5Q01650 507 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 BCL2L1Q07817 233 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 CRY1Q16526 586 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 FAXCQ5TGI0 409 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 KIAA1211LQ6NV74 962 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 PCGF5Q86SE9 256 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 TAB3Q8N5C8 712 aaPredicted RBP14.5□□□□□ -0.09
UPF1-211ENST00000600868 FLCNQ8NFG4 579 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 HCAR2Q8TDS4 363 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 SEC14L1Q92503 715 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 SPOCK2Q92563 424 aa14.5□□□□□ -0.09
UPF1-211ENST00000600868 SNF8Q96H20 258 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms