RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SMIM14Q96QK8 99 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 TSPAN18Q96SJ8 248 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 VAT1Q99536 393 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SH3GL3Q99963 347 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC7A8Q9UHI5 535 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 FBXO5Q9UKT4 447 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ATP6AP2A0A1C7CYW4 349 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 KCNU1A8MYU2 1149 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF623O75123 536 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ATP6AP2O75787 350 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 JUNP05412 331 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ETS2P15036 469 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 HOXC8P31273 242 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SOX11P35716 441 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF235Q14590 738 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 WASHC2DQ5SRD0 308 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 MRPL10Q7Z7H8 261 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 HDAC10Q969S8 669 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCNCP24863 283 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 CD151P48509 253 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 PKNOX1P55347 436 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 INHBEP58166 350 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 KIAA1841Q6NSI8 718 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 LAYNQ6UX15 382 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 PIM3Q86V86 326 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 HPS6Q86YV9 775 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF513Q8N8E2 541 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 RTL3Q8N8U3 475 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 IRGQQ8WZA9 623 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 RMDN1Q96DB5 314 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SEMA3CQ99985 751 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 RHOJQ9H4E5 214 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 GPAMQ9HCL2 828 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 NMRK1Q9NWW6 199 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 CDY1Q9Y6F8 540 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 TBKBP1A7MCY6 615 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 RAMP2O60895 175 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SMNDC1O75940 238 aaKnown RBP eCLIP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 PRSS56P0CW18 603 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 PAMP19021 973 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 HCAR3P49019 387 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 ANO7Q6IWH7 933 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SNX32Q86XE0 403 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 LGI2Q8N0V4 545 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 APBB2Q92870 758 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SMOC2Q9H3U7 446 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 PCDHB7Q9Y5E2 793 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.545e-8■■■■■ 114.5
ARHGEF1-220ENST00000600274 MAGEB16A2A368 324 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 G3V2L1 256 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 M0QZQ0 153 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZBTB14O43829 449 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 MPOP05164 745 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 MLLT6P55198 1093 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 BLMHQ13867 455 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 KRT72Q14CN4 511 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 MS4A13Q5J8X5 152 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 BRMS1LQ5PSV4 323 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 FRMD7Q6ZUT3 714 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMCO2Q7Z6W1 182 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 MON1AQ86VX9 555 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 OR7D4Q8NG98 312 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 HEXDCQ8WVB3 486 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 PGAP3Q96FM1 320 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 MRGPRX2Q96LB1 330 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZYG11BQ9C0D3 744 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 OSBPL2Q9H1P3 480 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 CRISPLD1Q9H336 500 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 POMKQ9H5K3 350 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZDHHC2Q9UIJ5 367 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 SSX2IPQ9Y2D8 614 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 TCAF1Q9Y4C2 921 aa11.65□□□□□ -0.54
ARHGEF1-220ENST00000600274 BNIP3LO60238 219 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 TLR5O60602 858 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC35E2BP0CK96 405 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 HDCP19113 662 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 DNAJB2P25686 324 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 PMLP29590 882 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 SCNN1BP51168 640 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDH13P55290 713 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC12A1Q13621 1099 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms