RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 USP12O75317 370 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 GP1BAP07359 652 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 ALPPL2P10696 532 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 RHOQP17081 205 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 ITIH2P19823 946 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 TGM2P21980 687 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 SDC4P31431 198 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 ACTN2P35609 894 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 RABIFP47224 123 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 MAPKAPK2P49137 400 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 PFN3P60673 137 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 HNRNPKP61978 463 aaKnown RBP eCLIP14.9□□□□□ -0.02
IRF3-223ENST00000599223 SLC20A2Q08357 652 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 DEFB133Q30KQ1 61 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 HS1BP3Q53T59 392 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 ZNF805Q5CZA5 627 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 OR2AP1Q8NGE2 309 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 FEM1CQ96JP0 617 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 DEPDC7Q96QD5 511 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 KLC2Q9H0B6 622 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 OSBPL2Q9H1P3 480 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 ASCL3Q9NQ33 180 aa14.9□□□□□ -0.02
IRF3-223ENST00000599223 FAM207AQ9NSI2 230 aaPredicted RBP14.9□□□□□ -0.02
IRF3-223ENST00000599223 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 LZTS3O60299 673 aaPredicted RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 RAMP2O60895 175 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 GCATO75600 419 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 TMCC1O94876 653 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 ZIC2O95409 532 aaPredicted RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 GSRP00390 522 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 JUNDP17535 347 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 EEF1GP26641 437 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 PTPN9P43378 593 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 POLR2FP61218 127 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 CDKAL1Q5VV42 579 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 ZCCHC8Q6NZY4 707 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 CRTC1Q6UUV9 634 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 NYAP1Q6ZVC0 841 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 EFL1Q7Z2Z2 1120 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 DCP2Q8IU60 420 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 PLPP6Q8IY26 295 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 PYROXD2Q8N2H3 581 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 FAM174AQ8TBP5 190 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 MAPK15Q8TD08 544 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 FAM172AQ8WUF8 416 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 CENPIQ92674 756 aaPredicted RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 ANP32BQ92688 251 aaKnown RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 TBC1D31Q96DN5 1066 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 LENG8Q96PV6 779 aaPredicted RBP14.89□□□□□ -0.03
IRF3-223ENST00000599223 LGMNQ99538 433 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 LRRC61Q9BV99 259 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 NLRC4Q9NPP4 1024 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
IRF3-223ENST00000599223 CXorf51AA0A1B0GTR3 108 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 NEMP2A6NFY4 417 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 H3BM21 787 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 FPGTO14772 594 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 AQP9O43315 295 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 TSPAN6O43657 245 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 DXOO77932 396 aaKnown RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 CELA2BP08218 269 aaPredicted RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 PLEKP08567 350 aaPredicted RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 UNGP13051 313 aaPredicted RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 RFC1P35251 1148 aaPredicted RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 SOX5P35711 763 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 ETFBP38117 255 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 PDX1P52945 283 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 PCBP4P57723 403 aaKnown RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 CXADRP78310 365 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 KRT31Q15323 416 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 PERM1Q5SV97 790 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 STRADAQ7RTN6 431 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 VPS36Q86VN1 386 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 ZNF677Q86XU0 584 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 DENND6BQ8NEG7 585 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 LMX1AQ8TE12 382 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 RAB7BQ96AH8 199 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 CENPTQ96BT3 561 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 DUSP23Q9BVJ7 150 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 MAGEH1Q9H213 219 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 VPS16Q9H269 839 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 USP29Q9HBJ7 922 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 MBNL1Q9NR56 388 aaKnown RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 DACH1Q9UI36 760 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 SIK3Q9Y2K2 1263 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 TENM4Q6N022 2769 aa14.88□□□□□ -0.03
IRF3-223ENST00000599223 ASH1LQ9NR48 2969 aaKnown RBP14.88□□□□□ -0.03
IRF3-223ENST00000599223 CPED1A4D0V7 1026 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 NEMP1O14524 444 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 INSIG1O15503 277 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 LSSP48449 732 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 GSCP56915 257 aaPredicted RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 SNRPD1P62314 119 aaKnown RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 SGCGQ13326 291 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 C1orf61Q13536 156 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 ISXQ2M1V0 245 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms