RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DCP1BQ8IZD4 617 aaKnown RBP15.59■□□□□ 0.09
PNKP-204ENST00000594661 PPP4R1Q8TF05 950 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 DCAKDQ8WVC6 231 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 CFAP36Q96G28 342 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 PGLYRP2Q96PD5 576 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 FRMD8Q9BZ67 464 aaPredicted RBP15.59■□□□□ 0.09
PNKP-204ENST00000594661 DOLKQ9UPQ8 538 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 SNX10Q9Y5X0 201 aa15.59■□□□□ 0.09
PNKP-204ENST00000594661 NT5C1B-RDH14C9J2C7 533 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 CCNT2O60583 730 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 DGKIO75912 1065 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 CXCL10P02778 98 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 FUCA1P04066 466 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 ENO1P06733 434 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 OCM2P0CE71 109 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 OCMP0CE72 109 aaPredicted RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 CXCR3P49682 368 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 RPS3AP61247 264 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 TBCCQ15814 346 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TRIM60Q495X7 471 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 CTXN3Q4LDR2 81 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 DEFB128Q7Z7B8 93 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TMEM173Q86WV6 379 aaPredicted RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 TRPC4APQ8TEL6 797 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 GCNAQ96QF7 691 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 BEGAINQ9BUH8 593 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 DTNAQ9Y4J8 743 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 MYO16Q9Y6X6 1858 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TBKBP1A7MCY6 615 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 DCLK1O15075 740 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 GCATO75600 419 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 SPAG6O75602 509 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 METTL18O95568 372 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 MYL2P10916 166 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TLE2Q04725 743 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 MRPL58Q14197 206 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 PRKD1Q15139 912 aaPredicted RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 DDR2Q16832 855 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 KCTD21Q4G0X4 260 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 IL23RQ5VWK5 629 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 HEATR6Q6AI08 1181 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 C16orf87Q6PH81 154 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 C4orf22Q6V702 233 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 CAND1Q86VP6 1230 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 CHSY1Q86X52 802 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TP53INP2Q8IXH6 220 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 TTC9BQ8N6N2 239 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.58■□□□□ 0.08
PNKP-204ENST00000594661 BORCS5Q969J3 196 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 EME1Q96AY2 570 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 LGMNQ99538 433 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 GPATCH1Q9BRR8 931 aaKnown RBP15.58■□□□□ 0.08
PNKP-204ENST00000594661 TKTL2Q9H0I9 626 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 WDCPQ9H6R7 721 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 IKBKGQ9Y6K9 419 aa15.58■□□□□ 0.08
PNKP-204ENST00000594661 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.57■□□□□ 0.08
PNKP-204ENST00000594661 F9P00740 461 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 IGLV3-25P01717 112 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 EIF2S1P05198 315 aaKnown RBP15.57■□□□□ 0.08
PNKP-204ENST00000594661 PTPN2P17706 415 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 MAGEA6P43360 314 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 METTL21CQ5VZV1 264 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 SCD5Q86SK9 330 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 NMUR1Q9HB89 426 aa15.57■□□□□ 0.08
PNKP-204ENST00000594661 FNDC1Q4ZHG4 1894 aaPredicted RBP15.57■□□□□ 0.08
PNKP-204ENST00000594661 GALTP07902 379 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 FGFR3P22607 806 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 CPOXP36551 454 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ALDH3B2P48448 385 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 TPI1P60174 286 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 BTKQ06187 659 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 PAFAH1B3Q15102 231 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 NFE2Q16621 373 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 ARL13BQ3SXY8 428 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ANKDD1AQ495B1 522 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ZNF280DQ6N043 979 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 BEND5Q7L4P6 421 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ATAD1Q8NBU5 361 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 MZB1Q8WU39 189 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 CHPT1Q8WUD6 406 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 TFB1MQ8WVM0 346 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 EFHD2Q96C19 240 aaPredicted RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 CLIP3Q96DZ5 547 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 DCUN1D1Q96GG9 259 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 FUBP3Q96I24 572 aaKnown RBP eCLIP15.56■□□□□ 0.08
PNKP-204ENST00000594661 NSMCE3Q96MG7 304 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ATAD3AQ9NVI7 634 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 KCNK4Q9NYG8 393 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 IGSF9Q9P2J2 1179 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ZC3H7BQ9UGR2 993 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.087e-7■■■■■ 86
PNKP-204ENST00000594661 CAPN8A6NHC0 703 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 GOLGA8RI6L899 631 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 HOXA2O43364 376 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 CNOT3O75175 753 aaKnown RBP15.56■□□□□ 0.08
PNKP-204ENST00000594661 INHBAP08476 426 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 THRAP10827 490 aa15.56■□□□□ 0.08
PNKP-204ENST00000594661 ZNF23P17027 643 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms