RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 OR6K2Q8NGY2 324 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 MAPK15Q8TD08 544 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 PRR11Q96HE9 360 aaPredicted RBP16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 LGMNQ99538 433 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 MAGEH1Q9H213 219 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 GANQ9H2C0 597 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 SAMSN1Q9NSI8 373 aaKnown RBP16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 EVA1BQ9NVM1 165 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
GTF2F1-203ENST00000594213 H3BM21 787 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 GCATO75600 419 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 LRIG2O94898 1065 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 PTPN9P43378 593 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 GEMIN4P57678 1058 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 CXADRP78310 365 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 FMO1Q01740 532 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 CDR2Q01850 454 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 CDKN3Q16667 212 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 DEFB133Q30KQ1 61 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 STRADAQ7RTN6 431 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 JOSD2Q8TAC2 188 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 GPT2Q8TD30 523 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 LMX1AQ8TE12 382 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 SNRNP27Q8WVK2 155 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 GRAMD1AQ96CP6 724 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 TBATAQ96M53 351 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 BOCQ9BWV1 1114 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 ABCG4Q9H172 646 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 TCEAL2Q9H3H9 227 aaPredicted RBP16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 NOL6Q9H6R4 1146 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 NCKIPSDQ9NZQ3 722 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 IPO11Q9UI26 975 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
GTF2F1-203ENST00000594213 DOCK4Q8N1I0 1966 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 SHROOM3Q8TF72 1996 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 CPED1A4D0V7 1026 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 KDELR3O43731 214 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 UGT2B4P06133 528 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 PLEKP08567 350 aaPredicted RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 IGFALSP35858 605 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 HDAC4P56524 1084 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 ARL13BQ3SXY8 428 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 RWDD4Q6NW29 188 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 EFL1Q7Z2Z2 1120 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 RBFAQ8N0V3 343 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 WBP1Q96G27 269 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 KLHL32Q96NJ5 620 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 SLC46A1Q96NT5 459 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 OSBPL1AQ9BXW6 950 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 MFHAS1Q9Y4C4 1052 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 ENTPD2Q9Y5L3 495 aa16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 TDRD6O60522 2096 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-203ENST00000594213 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 KRIT1O00522 736 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 RAMP2O60895 175 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 GJB6O95452 261 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 UNGP13051 313 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 TIMP2P16035 220 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 SDC4P31431 198 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 UCNP55089 124 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 GSCP56915 257 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 JAM2P57087 298 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 YPEL5P62699 121 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 POLD3Q15054 466 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 CDO1Q16878 200 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 PERM1Q5SV97 790 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 ATXN7L2Q5T6C5 722 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 GDPD4Q6W3E5 623 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 LEKR1Q6ZMV7 388 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 PHLDB2Q86SQ0 1253 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 SLC35F3Q8IY50 421 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 RYBPQ8N488 228 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 CCDC185Q8N715 623 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 SLC30A5Q8TAD4 765 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 BTN2A2Q8WVV5 523 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 NTAN1Q96AB6 310 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 TBC1D31Q96DN5 1066 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 ATXN7L3BQ96GX2 97 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 VCPIP1Q96JH7 1222 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 DPH1Q9BZG8 443 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 CLPBQ9H078 707 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 KLC2Q9H0B6 622 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 MBNL1Q9NR56 388 aaKnown RBP16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 SPASTQ9UBP0 616 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 DKK3Q9UBP4 350 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 PCDHGA8Q9Y5G5 932 aa16.12■□□□□ 0.17
GTF2F1-203ENST00000594213 NEMP1O14524 444 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 TOR1BO14657 336 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 EPHB6O15197 1021 aa16.11■□□□□ 0.17
GTF2F1-203ENST00000594213 CASC3O15234 703 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms