RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 KDELC2Q7Z4H8 507 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 ATP2A3Q93084 1043 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 FEM1CQ96JP0 617 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 ZFYVE19Q96K21 471 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 NSMCE3Q96MG7 304 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 CENPHQ9H3R5 247 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 PPCSQ9HAB8 311 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 FCF1Q9Y324 198 aaKnown RBP21.04■□□□□ 0.96
PNKP-203ENST00000593946 EYSQ5T1H1 3165 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 K7ERQ8 282 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 EPOP01588 193 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 GCAP28676 217 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 CHRNA4P43681 627 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 RHOAP61586 193 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 FCHO2Q0JRZ9 810 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 CRYMQ14894 314 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 SLC1A5Q15758 541 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 KLHL38Q2WGJ6 581 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 AGBL2Q5U5Z8 902 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 CYS1Q717R9 158 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 NAT16Q8N8M0 369 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 SMRP1Q8NCR6 262 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 ST13P5Q8NFI4 369 aaPredicted RBP21.04■□□□□ 0.96
PNKP-203ENST00000593946 CYTH2Q99418 400 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 EBF3Q9H4W6 596 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 POMKQ9H5K3 350 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 SCUBE2Q9NQ36 999 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 THG1LQ9NWX6 298 aaKnown RBP21.04■□□□□ 0.96
PNKP-203ENST00000593946 EURLQ9NYK6 297 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 HS3ST2Q9Y278 367 aa21.04■□□□□ 0.96
PNKP-203ENST00000593946 MAGEB16A2A368 324 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 SMAD6O43541 496 aaKnown RBP21.03■□□□□ 0.96
PNKP-203ENST00000593946 ATP9BO43861 1147 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 CDH16O75309 829 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 LAMP2P13473 410 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 PRKCHP24723 683 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 CTSOP43234 321 aaPredicted RBP21.03■□□□□ 0.96
PNKP-203ENST00000593946 EFTUD2Q15029 972 aaKnown RBP eCLIP21.03■□□□□ 0.967e-7■■■■■ 37.5
PNKP-203ENST00000593946 PDGFRLQ15198 375 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 TMEM135Q86UB9 458 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 ADIPOR2Q86V24 386 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 TDRPQ86YL5 185 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 RNF135Q8IUD6 432 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 MFSD6LQ8IWD5 586 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 SOX13Q9UN79 622 aa21.03■□□□□ 0.96
PNKP-203ENST00000593946 FAM237BA0A1B0GVD1 139 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 HMGB1P1B2RPK0 211 aaPredicted RBP21.02■□□□□ 0.96
PNKP-203ENST00000593946 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 POLBP06746 335 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 ATXN1LP0C7T5 689 aaKnown RBP21.02■□□□□ 0.96
PNKP-203ENST00000593946 IGFBP4P22692 258 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 GBP2P32456 591 aaPredicted RBP21.02■□□□□ 0.96
PNKP-203ENST00000593946 SULT2A1Q06520 285 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 CDK18Q07002 472 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 KBTBD12Q3ZCT8 623 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 TNFAIP8L3Q5GJ75 292 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 RALGPS1Q5JS13 557 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 KCTD16Q68DU8 428 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 AHI1Q8N157 1196 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 RIBC1Q8N443 379 aaPredicted RBP21.02■□□□□ 0.96
PNKP-203ENST00000593946 SLC25A41Q8N5S1 370 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 TRIB3Q96RU7 358 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 KIFC1Q9BW19 673 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 MOCS1Q9NZB8 636 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 CTNNAL1Q9UBT7 734 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 LGALS13Q9UHV8 139 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 SLC24A2Q9UI40 661 aa21.02■□□□□ 0.96
PNKP-203ENST00000593946 OTOL1A6NHN0 477 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 TRIM24O15164 1050 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 RGS16O15492 202 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 USP1O94782 785 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 SRCP12931 536 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 HLA-DPA1P20036 260 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 MSLNQ13421 630 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 RASA2Q15283 850 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 GAB4Q2WGN9 574 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 SIRPB2Q5JXA9 342 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 ARMC3Q5W041 872 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 TRMT10BQ6PF06 316 aaKnown RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 ETFBKMTQ8IXQ9 262 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 ELSPBP1Q96BH3 223 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 TLCD1Q96CP7 247 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 IFT43Q96FT9 208 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 RPL10LQ96L21 214 aaKnown RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 DHRS4Q9BTZ2 278 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 HPS4Q9NQG7 708 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 VPS18Q9P253 973 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 RPS6KL1Q9Y6S9 549 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 POC1B-GALNT4F8VUJ3 575 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 ZNF821O75541 412 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 CISD3P0C7P0 127 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 STK19P49842 368 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 MLLT1Q03111 559 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 POU6F1Q14863 301 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 PCID2Q5JVF3 399 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 SPANXN3Q5MJ09 141 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 TMEM215Q68D42 235 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 NCEH1Q6PIU2 408 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 C12orf40Q86WS4 652 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 SH2D3CQ8N5H7 860 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms