RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 WRAP53Q9BUR4 548 aaKnown RBP18.2■□□□□ 0.5
CIRBP-243ENST00000593128 OSBPL1AQ9BXW6 950 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 KLC2Q9H0B6 622 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 ABCG4Q9H172 646 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 NLGN3Q9NZ94 848 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 ARID1BQ8NFD5 2236 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-243ENST00000593128 CHD5Q8TDI0 1954 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 URB1O60287 2271 aaKnown RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 TLX3O43711 291 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 BRINP1O60477 761 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 MMP20O60882 483 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 XPAP23025 273 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 RPL7AP62424 266 aaKnown RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 CLEC17AQ6ZS10 378 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 RTL3Q8N8U3 475 aaKnown RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-243ENST00000593128 FAM174AQ8TBP5 190 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 LMX1AQ8TE12 382 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 CXorf40AQ8TE69 158 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 HMCESQ96FZ2 354 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 EPAS1Q99814 870 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 NRSN2Q9GZP1 204 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 RETREG1Q9H6L5 497 aa18.19■□□□□ 0.5
CIRBP-243ENST00000593128 A0A087WV48 116 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 SPTY2D1-AS1A0A0U1RR47 76 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 EIF4E1BA6NMX2 242 aaKnown RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 K7ESM1 405 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 RRP8O43159 456 aaKnown RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 CKMT1AP12532 417 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 JUNDP17535 347 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 ITIH2P19823 946 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 ITPKBP27987 946 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 THOP1P52888 689 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 GSCP56915 257 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 CDKN3Q16667 212 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 DEFB133Q30KQ1 61 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 TPRG1LQ5T0D9 272 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 RBM43Q6ZSC3 357 aaKnown RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 IFT43Q96FT9 208 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 KLF6Q99612 283 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-243ENST00000593128 C1QTNF2Q9BXJ5 285 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 TTYH3Q9C0H2 523 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 CATSPERBQ9H7T0 1116 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 EVA1BQ9NVM1 165 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 GPATCH2LQ9NWQ4 482 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 FZD10Q9ULW2 581 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 PCDHB1Q9Y5F3 818 aa18.18■□□□□ 0.5
CIRBP-243ENST00000593128 CPED1A4D0V7 1026 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 RASA4BC9J798 803 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 SCAMP1O15126 338 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 INSIG1O15503 277 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 AQP9O43315 295 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 RASA4O43374 803 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 PIGNO95427 931 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 CSF2P04141 144 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 GIMD1P0DJR0 217 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 TNFAIP3P21580 790 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 DUSP3P51452 185 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-243ENST00000593128 TPI1P60174 286 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 TCEA2Q15560 299 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 SOWAHCQ53LP3 525 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-243ENST00000593128 ACAD10Q6JQN1 1059 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 PAF1Q8N7H5 531 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 DCBLD1Q8N8Z6 715 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 IFI44Q8TCB0 444 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 MAPK15Q8TD08 544 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 BAP1Q92560 729 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 LENG8Q96PV6 779 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-243ENST00000593128 ERGIC2Q96RQ1 377 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 CNPY3Q9BT09 278 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 DUSP23Q9BVJ7 150 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
CIRBP-243ENST00000593128 KLF15Q9UIH9 416 aa18.17■□□□□ 0.5
CIRBP-243ENST00000593128 SPINT1O43278 529 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 ATMINO43313 823 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-243ENST00000593128 OPA1O60313 960 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 TM7SF2O76062 418 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 CCDC172P0C7W6 258 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 ATP1A3P13637 1013 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 NME1P15531 152 aaKnown RBP18.16■□□□□ 0.5
CIRBP-243ENST00000593128 FERP16591 822 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 EIF2S3P41091 472 aaKnown RBP18.16■□□□□ 0.5
CIRBP-243ENST00000593128 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 C1orf61Q13536 156 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 RTP5Q14D33 572 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 CFAP58Q5T655 872 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 CRTC1Q6UUV9 634 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 ZSCAN30Q86W11 494 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 RBFAQ8N0V3 343 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
CIRBP-243ENST00000593128 NAF1Q96HR8 494 aaKnown RBP18.16■□□□□ 0.5
CIRBP-243ENST00000593128 CELF6Q96J87 481 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms