RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ITKQ08881 620 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 KLF10Q13118 480 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 MARC1Q5VT66 337 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 NEPROQ6NW34 567 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 KIAA0408Q6ZU52 694 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 PHTF2Q8N3S3 785 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 CALML6Q8TD86 181 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 IMP4Q96G21 291 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 RANBP9Q96S59 729 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ARNT2Q9HBZ2 717 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 VTI1BQ9UEU0 232 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 TARM1B6A8C7 271 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 SLCO1B7G3V0H7 640 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 MAP3K7O43318 606 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ZBTB14O43829 449 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 CCNT2O60583 730 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 GLDCP23378 1020 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 NUMBP49757 651 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 SERPINH1P50454 418 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 NAGLUP54802 743 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 FAM189BP81408 668 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 CUL3Q13618 768 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 CTXN3Q4LDR2 81 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ARL13AQ5H913 290 aaPredicted RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ACAD11Q709F0 780 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 KIRREL3Q8IZU9 778 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ACTRT2Q8TDY3 377 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 SCG3Q8WXD2 468 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 FBXO32Q969P5 355 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 NXNL1Q96CM4 212 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 SHCBP1LQ9BZQ2 653 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 MRPL46Q9H2W6 279 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ATP13A1Q9HD20 1204 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 DNAH12Q6ZR08 3092 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 DLX3O60479 287 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 FKBP6O75344 327 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 CPB1P15086 417 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 ANPEPP15144 967 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 CD86P42081 329 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 TAS2R39P59534 338 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 TRIP4Q15650 581 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 PSMD5Q16401 504 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 RALGPS1Q5JS13 557 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 TRAF7Q6Q0C0 670 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 ZNF354CQ86Y25 554 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 STON2Q8WXE9 905 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 BTN2A3PQ96KV6 586 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 GPR78Q96P69 363 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 ARHGAP26Q9UNA1 814 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 TTC3P53804 2025 aa16.74■□□□□ 0.27
PRKCSH-217ENST00000592741 J3KR12 359 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ITGAXP20702 1163 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 YWHAQP27348 245 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 BLMHQ13867 455 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 MBTPS1Q14703 1052 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ALFQ53S48 1182 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 TSTD2Q5T7W7 516 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ZNF280DQ6N043 979 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 PDCD6IPQ8WUM4 868 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 GLT1D1Q96MS3 346 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 KLHL5Q96PQ7 755 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 MRPL57Q9BQC6 102 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 RTKNQ9BST9 563 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ACSS2Q9NR19 701 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CLIC5Q9NZA1 410 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 IL37Q9NZH6 218 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 MIA3Q5JRA6 1907 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 IGLV3-10A0A075B6K4 115 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 OR6C75A6NL08 312 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 NEMP1O14524 444 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 KRT34O76011 436 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CNTN5O94779 1100 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 RTN3O95197 1032 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ABL2P42684 1182 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CCR10P46092 362 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 PSEN1P49768 467 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CLCN5P51795 746 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 MAXP61244 160 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 BTKQ06187 659 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 SLC10A7Q0GE19 358 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 DLG1Q12959 904 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 AAGABQ6PD74 315 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 FRMD7Q6ZUT3 714 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 MOCOSQ96EN8 888 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■■■■□ 19.8
PRKCSH-217ENST00000592741 CYP4F11Q9HBI6 524 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 NDE1Q9NXR1 346 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-217ENST00000592741 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms