RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 FZD3Q9NPG1 666 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 PRDM8Q9NQV8 689 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 ANLNQ9NQW6 1124 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 KIAA1468Q9P260 1216 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 RWDD2AQ9UIY3 292 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 SARDHQ9UL12 918 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 TP53TG5Q9Y2B4 290 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 HS3ST4Q9Y661 456 aa7.56□□□□□ -1.2
VAT1-209ENST00000592388 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 TCAF2A6NFQ2 919 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 EFCAB7A8K855 629 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 C9orf172C9J069 976 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 RNF103O00237 685 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 NTN3O00634 580 aaPredicted RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 SLC31A1O15431 190 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 NKX2-8O15522 239 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 BNIP3LO60238 219 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 SNAP91O60641 907 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 HSF2BPO75031 334 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 PAGE1O75459 146 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 DAB1O75553 588 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 MOCS3O95396 460 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 PRKAR1AP10644 381 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 LIFP15018 202 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 PRLRP16471 622 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 C5AR1P21730 350 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 MTIF2P46199 727 aaKnown RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 HNRNPKP61978 463 aaKnown RBP eCLIP7.55□□□□□ -1.2
VAT1-209ENST00000592388 CDK17Q00537 523 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 AUHQ13825 339 aaKnown RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 ELAVL3Q14576 367 aaKnown RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 MEA1Q16626 185 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 DPCR1Q3MIW9 517 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ALFQ53S48 1182 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 C2CD6Q53TS8 623 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 TRNP1Q6NT89 227 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 Q6ZVU0 165 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ENOSF1Q7L5Y1 443 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 SLC22A18ASQ8N1D0 253 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ATP6V0D2Q8N8Y2 350 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 TMEM145Q8NBT3 493 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ZNF548Q8NEK5 533 aaPredicted RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 STK32AQ8WU08 396 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 RNF34Q969K3 372 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ALG14Q96F25 216 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 TCTN2Q96GX1 697 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 RPRD1AQ96P16 312 aaPredicted RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 NOX5Q96PH1 765 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 IL12RB2Q99665 862 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 TRIM62Q9BVG3 475 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 UNKQ9C0B0 810 aaKnown RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 PIGVQ9NUD9 493 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 NCKIPSDQ9NZQ3 722 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 ERRFI1Q9UJM3 462 aaPredicted RBP7.55□□□□□ -1.2
VAT1-209ENST00000592388 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 DNAJC12Q9UKB3 198 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 PCDHGC3Q9UN70 934 aa7.55□□□□□ -1.2
VAT1-209ENST00000592388 PDZD2O15018 2839 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 TMX2-CTNND1H3BSU7 103 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 M0QYT0 321 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 HNRNPRO43390 633 aaKnown RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 DUX1O43812 170 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 CNTN5O94779 1100 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 ADCY5O95622 1261 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 FGFR1OPO95684 399 aaKnown RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 ADH1BP00325 375 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 LDLRP01130 860 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 CTSLP07711 333 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 CCR1P32246 355 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 NOS2P35228 1153 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 CLCN1P35523 988 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 NUDT1P36639 197 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 SULT1E1P49888 294 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 CLDN2P57739 230 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 RNASE9P60153 205 aaKnown RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 UBE2HP62256 183 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 MRPL49Q13405 166 aaKnown RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 DEFB109BQ30KR1 87 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 ACCSLQ4AC99 568 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 MIIPQ5JXC2 388 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 RABGAP1LQ5R372 815 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 AGBL4Q5VU57 503 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 TAF3Q5VWG9 929 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 DPY19L2P1Q6NXN4 242 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 C11orf57Q6ZUT1 292 aaPredicted RBP7.54□□□□□ -1.2
VAT1-209ENST00000592388 SLC26A9Q7LBE3 791 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 SLC35F3Q8IY50 421 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 SLC34A3Q8N130 599 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 IL22RA1Q8N6P7 574 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 KDM1BQ8NB78 822 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 LMX1AQ8TE12 382 aa7.54□□□□□ -1.2
VAT1-209ENST00000592388 NAT6Q93015 286 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms