RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GRIK2Q13002 908 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SGCGQ13326 291 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 DPYSL3Q14195 570 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ANKRD20A8PQ5CZ79 823 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 PIP5KL1Q5T9C9 394 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 AFMIDQ63HM1 303 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ARHGAP36Q6ZRI8 547 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SRLQ86TD4 932 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 RFX6Q8HWS3 928 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 LRRC49Q8IUZ0 686 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 RHOT1Q8IXI2 618 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 NPWQ8N729 165 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 CCNYQ8ND76 341 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 KLK6Q92876 244 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 RAB7BQ96AH8 199 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SLC6A18Q96N87 628 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF599Q96NL3 588 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF670Q9BS34 389 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SLC32A1Q9H598 525 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 GAREM1Q9H706 876 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 DDX56Q9NY93 547 aaKnown RBP10.21□□□□□ -0.77
BRCA1-227ENST00000591849 DMTF1Q9Y222 760 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.21□□□□□ -0.77
BRCA1-227ENST00000591849 HYOU1Q9Y4L1 999 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 PRAMEF26H0Y7S4 382 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 CDX4O14627 284 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 APOL1O14791 398 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 INSIG1O15503 277 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TSPAN6O43657 245 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 LCA5LO95447 670 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 ZFXP17010 805 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 MX2P20592 715 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 COMTP21964 271 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 CD38P28907 300 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 SERPINA4P29622 427 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 GRIA4P48058 902 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PPP2CBP62714 309 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 RPS21P63220 83 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PPP2CAP67775 309 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 BCL2L1Q07817 233 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 CKAP5Q14008 2032 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 SUZ12Q15022 739 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TCEAL1Q15170 157 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 MARC1Q5VT66 337 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 LRRC38Q5VT99 294 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 NAPEPLDQ6IQ20 393 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 ERAP2Q6P179 960 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PARS2Q7L3T8 475 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 DAAM2Q86T65 1068 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TRIM69Q86WT6 500 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 HORMAD1Q86X24 394 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TP53INP2Q8IXH6 220 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TSEN2Q8NCE0 465 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 OR2I1PQ8NGU4 316 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PCDH19Q8TAB3 1148 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 RAPGEF5Q92565 580 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TSC1Q92574 1164 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 NUP205Q92621 2012 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 RNF25Q96BH1 459 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 CALR3Q96L12 384 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 TUBGCP5Q96RT8 1024 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 MYOCQ99972 504 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 CPEB1Q9BZB8 566 aaKnown RBP10.2□□□□□ -0.78
BRCA1-227ENST00000591849 SUV39H2Q9H5I1 410 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 ATP13A3Q9H7F0 1226 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PDFQ9HBH1 243 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 SCUBE2Q9NQ36 999 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 LHX3Q9UBR4 397 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 ANKRD6Q9Y2G4 727 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 PCDHB9Q9Y5E1 797 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 FADS3Q9Y5Q0 445 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 ALG6Q9Y672 507 aa10.2□□□□□ -0.78
BRCA1-227ENST00000591849 A0A0A6YYK5 440 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 AP1G1O43747 822 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 BUB1BO60566 1050 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 MAFKO60675 156 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 PIGNO95427 931 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 PRLRP16471 622 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 IL4RP24394 825 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 HSPA9P38646 679 aaKnown RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 MMP13P45452 471 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 CSNK1DP48730 415 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 ARSEP51690 589 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 GSDMDP57764 484 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 TAS2R38P59533 333 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 AP1S1P61966 158 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 POLR2LP62875 67 aaKnown RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 NSUN2Q08J23 767 aaKnown RBP eCLIP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 SLC10A7Q0GE19 358 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 ELP6Q0PNE2 266 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 PAFAH1B3Q15102 231 aaKnown RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 IFI16Q16666 785 aaKnown RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 KIF19Q2TAC6 998 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 HLA-BQ31612 363 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 PPM1JQ5JR12 505 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 KIAA1161Q6NSJ0 714 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 TIGD7Q6NT04 549 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 LAYNQ6UX15 382 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms