RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 C1orf131Q8NDD1 294 aaKnown RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF248Q8NDW4 579 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 OR4C6Q8NH72 309 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 GRAMD1AQ96CP6 724 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF578Q96N58 590 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 BBC3Q96PG8 261 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 LGMNQ99538 433 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CRACR2AQ9BSW2 395 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 ACP6Q9NPH0 428 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 NLGN3Q9NZ94 848 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 APEX2Q9UBZ4 518 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 AJAP1Q9UKB5 411 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 SARDHQ9UL12 918 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 MUC22E2RYF6 1773 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 IGSF10Q6WRI0 2623 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 SMG1Q96Q15 3661 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CABIN1Q9Y6J0 2220 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CELSR3Q9NYQ7 3312 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 PLXNB3Q9ULL4 1909 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 GTPBP10A4D1E9 387 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 A6NNZ2 444 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 M0QYT0 321 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 SDC3O75056 442 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 PAGE1O75459 146 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 DAB1O75553 588 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CKMT1AP12532 417 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 SLC9A1P19634 815 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ITPKBP27987 946 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 MTIF2P46199 727 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 PCBP4P57723 403 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 HNRNPKP61978 463 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 RPS21P63220 83 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 SLC6A3Q01959 620 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 EXOC3L4Q17RC7 722 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 POM121L1PQ3SYA9 428 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 C5orf22Q49AR2 442 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 TCP11X2Q5H9J9 407 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CDKAL1Q5VV42 579 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 TRIM65Q6PJ69 517 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF783Q6ZMS7 281 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 KDM7AQ6ZMT4 941 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ERN2Q76MJ5 926 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 SLC26A9Q7LBE3 791 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 KANSL1Q7Z3B3 1105 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 DCAF4L2Q8NA75 395 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 TMEM145Q8NBT3 493 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ALG14Q96F25 216 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 FEM1CQ96JP0 617 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 C1orf74Q96LT6 269 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CPXM1Q96SM3 734 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 CALN1Q9BXU9 219 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 HDAC8Q9BY41 377 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 ZCCHC2Q9C0B9 1178 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 SIK2Q9H0K1 926 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 FANCLQ9NW38 375 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 IL36AQ9UHA7 158 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 IPO11Q9UI26 975 aaKnown RBP9.63□□□□□ -0.87
BRCA1-226ENST00000591534 HS3ST4Q9Y661 456 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 HS3ST3A1Q9Y663 406 aa9.63□□□□□ -0.87
BRCA1-226ENST00000591534 A0A1W2PQC6 194 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TRIM38O00635 465 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 SCAMP1O15126 338 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-226ENST00000591534 GRAP2O75791 330 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ADCY5O95622 1261 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 SRCP12931 536 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 PCSK2P16519 638 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 OR1E1P30953 314 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ETFBP38117 255 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 RABIFP47224 123 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ARSDP51689 593 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 NEK3P51956 506 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 GEMIN4P57678 1058 aaKnown RBP9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TMPRSS3P57727 454 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ERVPABLB-1P60509 514 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 FANCCQ00597 558 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 RHDQ02161 417 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 DEUP1Q05D60 604 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 SGCGQ13326 291 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TAF5Q15542 800 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 MAN2A1Q16706 1144 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF284Q2VY69 593 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 PIP5KL1Q5T9C9 394 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 KIAA1161Q6NSJ0 714 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 OLFML1Q6UWY5 402 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 RIPOR1Q6ZS17 1223 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 FAM183BPQ6ZVS7 135 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF605Q86T29 641 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 SLC25A45Q8N413 288 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TMEM35BQ8NCS4 154 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 CCDC112Q8NEF3 446 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 OR2A12Q8NGT7 310 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 EDEM3Q9BZQ6 932 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms