RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 FAM47DPA6NHR8 397 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 LIASO43766 372 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 NDUFS2O75306 463 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 IFNB1P01574 187 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 C5AR1P21730 350 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 ACTN2P35609 894 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 MAPK8P45983 427 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 NUBP1P53384 320 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 METAP1P53582 386 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 AP1S1P61966 158 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
DDX39A-213ENST00000590315 GRM3Q14832 879 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 GDPD4Q6W3E5 623 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-213ENST00000590315 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 ARHGEF18Q6ZSZ5 1173 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 WDR5BQ86VZ2 330 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 LONP2Q86WA8 852 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 RASSF3Q86WH2 238 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 TAB3Q8N5C8 712 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-213ENST00000590315 TEX26Q8N6G2 289 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 FATE1Q969F0 183 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 ARRDC3Q96B67 414 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 IL12RB2Q99665 862 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 MGME1Q9BQP7 344 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 TMEM121Q9BTD3 319 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 OSBPL1AQ9BXW6 950 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
DDX39A-213ENST00000590315 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
DDX39A-213ENST00000590315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 BCLAF3A2AJT9 711 aaKnown RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CFAP69A5D8W1 941 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CES2O00748 559 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZNF217O75362 1048 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 SERPINF2P08697 491 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 NFKB1P19838 968 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CA4P22748 312 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CD86P42081 329 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 SRSF5Q13243 272 aaKnown RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 PCSK7Q16549 785 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 TEX44Q53QW1 395 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 LRRC73Q5JTD7 316 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 PAPD7Q5XG87 772 aaKnown RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ITPRIPL1Q6GPH6 555 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 KBTBD6Q86V97 674 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CAMK1DQ8IU85 385 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZNF567Q8N184 647 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 RASGEF1CQ8N431 466 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 AADATQ8N5Z0 425 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 FAM160A2Q8N612 972 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CCDC89Q8N998 374 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 FAM71DQ8N9W8 422 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 LRIG1Q96JA1 1093 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 TUBGCP5Q96RT8 1024 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 VAT1Q99536 393 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-213ENST00000590315 NOD2Q9HC29 1040 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CD248Q9HCU0 757 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 ZSCAN32Q9NX65 697 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 EBF1Q9UH73 591 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 AMACRQ9UHK6 382 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 TRPM6Q9BX84 2022 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
DDX39A-213ENST00000590315 NEMP1O14524 444 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 RPP40O75818 363 aaKnown RBP13□□□□□ -0.33
DDX39A-213ENST00000590315 URI1O94763 535 aaPredicted RBP13□□□□□ -0.33
DDX39A-213ENST00000590315 CPP00450 1065 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 TDGF1P13385 188 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 ITGB7P26010 798 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 CSNK1DP48730 415 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 TPMTP51580 245 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 NEK3P51956 506 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 EPHB1P54762 984 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 WASHC5Q12768 1159 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 CNTN1Q12860 1018 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 PRPSAP1Q14558 356 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 SIX1Q15475 284 aaPredicted RBP13□□□□□ -0.33
DDX39A-213ENST00000590315 CCNG2Q16589 344 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 ZNF805Q5CZA5 627 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 ANKRD20A2Q5SQ80 823 aa13□□□□□ -0.33
DDX39A-213ENST00000590315 ANKRD20A1Q5TYW2 823 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms