RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 KIAA1324Q6UXG2 1013 aaKnown RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 PRPF39Q86UA1 669 aaKnown RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 LRRC8AQ8IWT6 810 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 IZUMO1Q8IYV9 350 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 ZNF366Q8N895 744 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 MLKLQ8NB16 471 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SUPT20HQ8NEM7 779 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 OR56A1Q8NGH5 318 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 OSCP1Q8WVF1 389 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 DHX58Q96C10 678 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 PERPQ96FX8 193 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 LBHD1Q9BQE6 289 aaPredicted RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 TMEM47Q9BQJ4 181 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 ZSWIM1Q9BR11 485 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SPZ1Q9BXG8 430 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SYNPO2LQ9H987 977 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 MSL2Q9HCI7 577 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 ERVK-5Q9HDB9 667 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 IL17RBQ9NRM6 502 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 RXFP3Q9NSD7 469 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 IFNKQ9P0W0 207 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 MAD2L2Q9UI95 211 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 CD207Q9UJ71 328 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 MAN1B1Q9UKM7 699 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 ZHX1Q9UKY1 873 aaPredicted RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SARDHQ9UL12 918 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 CORO1CQ9ULV4 474 aaPredicted RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 DRG1Q9Y295 367 aaKnown RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 UBE2J1Q9Y385 318 aaPredicted RBP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SH3BP1Q9Y3L3 701 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 ZNF711Q9Y462 761 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 KCTD3Q9Y597 815 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 SCN9AQ15858 1988 aa4.41□□□□□ -1.7
CAPNS1-210ENST00000590211 TBC1D3DA0A087WVF3 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3IA0A087WXS9 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3EA0A087X179 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3KA0A087X1G2 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 GOLGA6L10A0A0M3HER8 536 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3BA6NDS4 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 GAGE10A6NGK3 116 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 MROH6A6NGR9 719 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3LB9A6J9 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 KLRF2D3W0D1 207 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 IPO13O94829 963 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CCNDBP1O95273 360 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 VNN1O95497 513 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 GPANK1O95872 356 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 SERPINC1P01008 464 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ERBB2P04626 1255 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 URODP06132 367 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CYP3A4P08684 503 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 MMP10P09238 476 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 SPARCP09486 303 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 INHBBP09529 407 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3HP0C7X1 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CD19P15391 556 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 GNA11P29992 359 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 MCM7P33993 719 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 LONP1P36776 959 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 NNMTP40261 264 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 NAPAP54920 295 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 UBASH3AP57075 661 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 SNX16P57768 344 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 FKBP1AP62942 108 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 FPGSQ05932 587 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 LRMPQ12912 555 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 EPS8Q12929 822 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ORC2Q13416 577 aaPredicted RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 HLXQ14774 488 aaPredicted RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 GRM7Q14831 915 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ELAVL1Q15717 326 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ASPRV1Q53RT3 343 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 EARS2Q5JPH6 523 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 HECTD3Q5T447 861 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 C1QL3Q5VWW1 255 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3GQ6DHY5 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ISM2Q6H9L7 571 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3CQ6IPX1 549 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ADGRG6Q86SQ4 1221 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ADGRG5Q8IZF4 528 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TBC1D3Q8IZP1 549 aaPredicted RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 WDTC1Q8N5D0 677 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 MB21D1Q8N884 522 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CCDC112Q8NEF3 446 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 CACTINQ8WUQ7 758 aaKnown RBP4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ATG4AQ8WYN0 398 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 TEKT1Q969V4 418 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 ATP6V1E2Q96A05 226 aa4.4□□□□□ -1.71
CAPNS1-210ENST00000590211 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms