RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TMC6Q7Z403 805 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 IRF2BP2Q7Z5L9 587 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 DNAAF5Q86Y56 855 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 HMCESQ96FZ2 354 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 DNAJC28Q9NX36 388 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 ATRXP46100 2492 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 K7ESM1 405 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 INSIG1O15503 277 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 BUB1O43683 1085 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 CREB3O43889 395 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 POP4O95707 220 aaKnown RBP18.27■□□□□ 0.52
H3F3B-209ENST00000589949 ITPKBP27987 946 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 SNRPD1P62314 119 aaKnown RBP18.27■□□□□ 0.52
H3F3B-209ENST00000589949 EIF2B5Q13144 721 aaKnown RBP18.27■□□□□ 0.52
H3F3B-209ENST00000589949 RTP5Q14D33 572 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 DNAJC24Q6P3W2 148 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 MCOLN2Q8IZK6 566 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 ARFGAP1Q8N6T3 406 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 DCBLD1Q8N8Z6 715 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 NXPE2Q96DL1 559 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 IFT43Q96FT9 208 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 APOLD1Q96LR9 279 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 DCBLD2Q96PD2 775 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 BBC3Q96PG8 261 aaPredicted RBP18.27■□□□□ 0.52
H3F3B-209ENST00000589949 LENG8Q96PV6 779 aaPredicted RBP18.27■□□□□ 0.52
H3F3B-209ENST00000589949 GPATCH2LQ9NWQ4 482 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 HPCAL4Q9UM19 191 aa18.27■□□□□ 0.52
H3F3B-209ENST00000589949 RASA4BC9J798 803 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 SCAMP1O15126 338 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 RASA4O43374 803 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 TSPAN6O43657 245 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CSF2P04141 144 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CKMT1AP12532 417 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 NME1P15531 152 aaKnown RBP18.26■□□□□ 0.51
H3F3B-209ENST00000589949 GEMIN4P57678 1058 aaKnown RBP18.26■□□□□ 0.51
H3F3B-209ENST00000589949 PFN3P60673 137 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 SERINC3Q13530 473 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CYTH1Q15438 398 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 ACAD10Q6JQN1 1059 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 GDPD4Q6W3E5 623 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 AOPEPQ8N6M6 819 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 ZNF548Q8NEK5 533 aaPredicted RBP18.26■□□□□ 0.51
H3F3B-209ENST00000589949 RAB7BQ96AH8 199 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CENPTQ96BT3 561 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CNPY3Q9BT09 278 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 TTYH3Q9C0H2 523 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 NRSN2Q9GZP1 204 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 TCEAL2Q9H3H9 227 aaPredicted RBP18.26■□□□□ 0.51
H3F3B-209ENST00000589949 NLGN3Q9NZ94 848 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 LHX3Q9UBR4 397 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 CLCA2Q9UQC9 943 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 PCDHB1Q9Y5F3 818 aa18.26■□□□□ 0.51
H3F3B-209ENST00000589949 WASH4PA8MWX3 477 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 OPA1O60313 960 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 MMP20O60882 483 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 MT-CO3P00414 261 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 TIMP2P16035 220 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
H3F3B-209ENST00000589949 IGFALSP35858 605 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 DAB2P98082 770 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 SGCGQ13326 291 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 PDE1CQ14123 709 aaPredicted RBP18.25■□□□□ 0.51
H3F3B-209ENST00000589949 CA9Q16790 459 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 EFHC2Q5JST6 749 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 CDCP2Q5VXM1 449 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 E4F1Q66K89 784 aaPredicted RBP18.25■□□□□ 0.51
H3F3B-209ENST00000589949 DCP2Q8IU60 420 aaKnown RBP18.25■□□□□ 0.51
H3F3B-209ENST00000589949 RBFAQ8N0V3 343 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 CACTIN-AS1Q8N1I8 211 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 UMODL1-AS1Q8N2C9 162 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 ASB12Q8WXK4 309 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 EXOC2Q96KP1 924 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 MBNL1Q9NR56 388 aaKnown RBP18.25■□□□□ 0.51
H3F3B-209ENST00000589949 MFHAS1Q9Y4C4 1052 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 AK5Q9Y6K8 562 aa18.25■□□□□ 0.51
H3F3B-209ENST00000589949 J3KR12 359 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 NEMP1O14524 444 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 FPGTO14772 594 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 CASC3O15234 703 aaKnown RBP18.24■□□□□ 0.51
H3F3B-209ENST00000589949 ATMINO43313 823 aaPredicted RBP18.24■□□□□ 0.51
H3F3B-209ENST00000589949 BRINP1O60477 761 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 RABIFP47224 123 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 HNRNPKP61978 463 aaKnown RBP eCLIP18.24■□□□□ 0.51
H3F3B-209ENST00000589949 TYRO3Q06418 890 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 MAMLD1Q13495 774 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 INO80DQ53TQ3 878 aaPredicted RBP18.24■□□□□ 0.51
H3F3B-209ENST00000589949 NYAP1Q6ZVC0 841 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 VPS36Q86VN1 386 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 PARGQ86W56 976 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 ZNF354CQ86Y25 554 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 FAM181AQ8N9Y4 354 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 ANKRD20A12PQ8NF67 263 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 FAM174AQ8TBP5 190 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 GDAP1L1Q96MZ0 367 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 TRIM7Q9C029 511 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 LRRC19Q9H756 370 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms