RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 DUSP23Q9BVJ7 150 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 RETREG1Q9H6L5 497 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 NOL6Q9H6R4 1146 aaKnown RBP16.53■□□□□ 0.24
MBD3-206ENST00000589901 ADAM22Q9P0K1 906 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 SIK3Q9Y2K2 1263 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 DOCK4Q8N1I0 1966 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 MGAQ8IWI9 3026 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 AREL1O15033 823 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 BUB1O43683 1085 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 KDELR3O43731 214 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 POP4O95707 220 aaKnown RBP16.52■□□□□ 0.24
MBD3-206ENST00000589901 GP1BAP07359 652 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 JUNDP17535 347 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 ACTN2P35609 894 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 STAT1P42224 750 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 NSFP46459 744 aaKnown RBP16.52■□□□□ 0.24
MBD3-206ENST00000589901 PFN3P60673 137 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 EIF2B5Q13144 721 aaKnown RBP16.52■□□□□ 0.24
MBD3-206ENST00000589901 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 WDR59Q6PJI9 974 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 TRIM72Q6ZMU5 477 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 ZSCAN30Q86W11 494 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 ZNF354CQ86Y25 554 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 IFI44Q8TCB0 444 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 LMX1AQ8TE12 382 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 NTAN1Q96AB6 310 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 FCRL3Q96P31 734 aaPredicted RBP16.52■□□□□ 0.24
MBD3-206ENST00000589901 UBL7Q96S82 380 aaPredicted RBP16.52■□□□□ 0.24
MBD3-206ENST00000589901 KLC2Q9H0B6 622 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 ABCG4Q9H172 646 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 FANCLQ9NW38 375 aa16.52■□□□□ 0.24
MBD3-206ENST00000589901 MYLKQ15746 1914 aa16.52■□□□□ 0.23
MBD3-206ENST00000589901 H3BM21 787 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 AQP9O43315 295 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 USP12O75317 370 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 CSO75390 466 aaKnown RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 TMCC1O94876 653 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 PRB1P04280 392 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 ITIH2P19823 946 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 GPD1P21695 349 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 DUSP3P51452 185 aaPredicted RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 TLE3Q04726 772 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 SYCP1Q15431 976 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 CDKN3Q16667 212 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 CLEC16AQ2KHT3 1053 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 DEFB133Q30KQ1 61 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 ZCCHC8Q6NZY4 707 aaKnown RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 GDPD4Q6W3E5 623 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 SLFN11Q7Z7L1 901 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 TTC7BQ86TV6 843 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 VPS36Q86VN1 386 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 RBFAQ8N0V3 343 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 DENND6BQ8NEG7 585 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 MAPK15Q8TD08 544 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 ASB12Q8WXK4 309 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 CENPTQ96BT3 561 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 SELENOOQ9BVL4 669 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 OSBPL1AQ9BXW6 950 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 TCEAL2Q9H3H9 227 aaPredicted RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 PNMA8BQ9ULN7 279 aaPredicted RBP16.51■□□□□ 0.23
MBD3-206ENST00000589901 CSNK1G3Q9Y6M4 447 aa16.51■□□□□ 0.23
MBD3-206ENST00000589901 TRPM6Q9BX84 2022 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 CPED1A4D0V7 1026 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 CCP110O43303 1012 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 MMP20O60882 483 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 TPM2P07951 284 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 TGM2P21980 687 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 EPHB2P29323 1055 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 IGFALSP35858 605 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 GABREP78334 506 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 SCYL2Q6P3W7 929 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 GUSBP11Q6P575 273 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 PHF13Q86YI8 300 aaPredicted RBP16.5■□□□□ 0.23
MBD3-206ENST00000589901 SPACA3Q8IXA5 215 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
MBD3-206ENST00000589901 C3orf20Q8ND61 904 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 ARHGEF26Q96DR7 871 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
MBD3-206ENST00000589901 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 TTYH3Q9C0H2 523 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
MBD3-206ENST00000589901 CFAP46Q8IYW2 2715 aa16.5■□□□□ 0.23
MBD3-206ENST00000589901 ATMQ13315 3056 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 TCRBV5S1A1TA0A578 114 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 CREB3O43889 395 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 GCATO75600 419 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 CALB1P05937 261 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 THOP1P52888 689 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 COPB1P53618 953 aaKnown RBP16.49■□□□□ 0.23
MBD3-206ENST00000589901 RHOAP61586 193 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 C1orf61Q13536 156 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 CRTC1Q6UUV9 634 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 MON1BQ7L1V2 547 aa16.49■□□□□ 0.23
MBD3-206ENST00000589901 EFL1Q7Z2Z2 1120 aaKnown RBP16.49■□□□□ 0.23
MBD3-206ENST00000589901 HMCESQ96FZ2 354 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms