RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 GCAP28676 217 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 CTSOP43234 321 aaPredicted RBP26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 SLCO1A2P46721 670 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 SCNN1BP51168 640 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 SLC20A2Q08357 652 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 DMC1Q14565 340 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 GAB4Q2WGN9 574 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 CROCCP2Q86T23 111 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 ADIPOR2Q86V24 386 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 RNF135Q8IUD6 432 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 MFSD6LQ8IWD5 586 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 CCDC77Q9BR77 488 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 COL4A3Q01955 1670 aa26.34■■□□□ 1.81
SCAMP4-210ENST00000588555 EXOC1LA0A1B0GW35 172 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 GOLGA8KD6RF30 607 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 ATXN1LP0C7T5 689 aaKnown RBP26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 GBP2P32456 591 aaPredicted RBP26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 PDGFRLQ15198 375 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 ETFBKMTQ8IXQ9 262 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 GSDMBQ8TAX9 411 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 FEM1CQ96JP0 617 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 PKNOX2Q96KN3 472 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 PLA2G2FQ9BZM2 168 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 HPS4Q9NQG7 708 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 THG1LQ9NWX6 298 aaKnown RBP26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 EURLQ9NYK6 297 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 HS3ST2Q9Y278 367 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 MYLKQ15746 1914 aa26.33■■□□□ 1.81
SCAMP4-210ENST00000588555 SMIM23A6NLE4 172 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 CISD3P0C7P0 127 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 RHOAP61586 193 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 SLC1A5Q15758 541 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 TMEM215Q68D42 235 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 METTL3Q86U44 580 aaKnown RBP26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 C12orf40Q86WS4 652 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 PGM2Q96G03 612 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 TRIB3Q96RU7 358 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 SCUBE2Q9NQ36 999 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 SAMD15Q9P1V8 674 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 FETUBQ9UGM5 382 aa26.33■■□□□ 1.8
SCAMP4-210ENST00000588555 TLDC2A0PJX2 215 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 ATP9BO43861 1147 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 ZNF821O75541 412 aaPredicted RBP26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 EPOP01588 193 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 IVLP07476 585 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 STK19P49842 368 aaPredicted RBP26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 CDK18Q07002 472 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 MSLNQ13421 630 aaPredicted RBP26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 CRYMQ14894 314 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 EFTUD2Q15029 972 aaKnown RBP eCLIP26.32■■□□□ 1.87e-15■■■■■ 65.8
SCAMP4-210ENST00000588555 TMEM135Q86UB9 458 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 FGF14Q92915 247 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 ELSPBP1Q96BH3 223 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 RPL10LQ96L21 214 aaKnown RBP26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 ATP6V1G3Q96LB4 118 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 ECT2Q9H8V3 914 aa26.32■■□□□ 1.8
SCAMP4-210ENST00000588555 SRCP12931 536 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 PRKCHP24723 683 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 STX2P32856 288 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 GEN1Q17RS7 908 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 SIRPB2Q5JXA9 342 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 PARM1Q6UWI2 310 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 CYS1Q717R9 158 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 AHI1Q8N157 1196 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 SLC25A41Q8N5S1 370 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 SUSD6Q92537 303 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 CYTH2Q99418 400 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 CENPHQ9H3R5 247 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 MOCS1Q9NZB8 636 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 SOX13Q9UN79 622 aa26.31■■□□□ 1.8
SCAMP4-210ENST00000588555 FAM237BA0A1B0GVD1 139 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 MAGEB16A2A368 324 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 PIAS1O75925 651 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 ALDH1A2O94788 518 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 SULT2A1Q06520 285 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 KLHL38Q2WGJ6 581 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 RALGPS1Q5JS13 557 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 ATXN7L2Q5T6C5 722 aaPredicted RBP26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 TRMT10BQ6PF06 316 aaKnown RBP26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 NCEH1Q6PIU2 408 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 TDRPQ86YL5 185 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 MICALL1Q8N3F8 863 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 TTC17Q96AE7 1141 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 FAM161BQ96MY7 647 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 NECTIN4Q96NY8 510 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 KXD1Q9BQD3 176 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 KIFC1Q9BW19 673 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 TDRD1Q9BXT4 1180 aaKnown RBP26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 CHRAC1Q9NRG0 131 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 CTNNAL1Q9UBT7 734 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 SLC27A6Q9Y2P4 619 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 POLBP06746 335 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 DGKGP49619 791 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 KBTBD12Q3ZCT8 623 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 TNFAIP8L3Q5GJ75 292 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 AGBL2Q5U5Z8 902 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 MBLAC2Q68D91 279 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 KCTD16Q68DU8 428 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 SH2D3CQ8N5H7 860 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 LRCH3Q96II8 777 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms