RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 NOS2P35228 1153 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 RECQLP46063 649 aaPredicted RBP8.72□□□□□ -1.01
SDF2-204ENST00000587338 MTIF2P46199 727 aaKnown RBP8.72□□□□□ -1.01
SDF2-204ENST00000587338 THOP1P52888 689 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 UBASH3AP57075 661 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 KRT83P78385 493 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 CCL7P80098 99 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 STILQ15468 1287 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 TCEA2Q15560 299 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 CNGA2Q16280 664 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 CCDC40Q4G0X9 1142 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 FILIP1LQ4L180 1135 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 ZCWPW2Q504Y3 356 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 ARSIQ5FYB1 569 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 C22orf39Q6P5X5 142 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 LINGO4Q6UY18 593 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 ARL10Q8N8L6 244 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 KYQ8NBH2 561 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 ZNF564Q8TBZ8 553 aaPredicted RBP8.72□□□□□ -1.01
SDF2-204ENST00000587338 C2orf49Q9BVC5 232 aaPredicted RBP8.72□□□□□ -1.01
SDF2-204ENST00000587338 CPEB1Q9BZB8 566 aaKnown RBP8.72□□□□□ -1.01
SDF2-204ENST00000587338 SLC13A1Q9BZW2 595 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 THAP9Q9H5L6 903 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 POPDC2Q9HBU9 364 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.72□□□□□ -1.01
SDF2-204ENST00000587338 DDIT4Q9NX09 232 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 VPS51Q9UID3 782 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 VANGL2Q9ULK5 521 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 PCDHB11Q9Y5F2 797 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 OR51B4Q9Y5P0 310 aa8.72□□□□□ -1.01
SDF2-204ENST00000587338 ICE1Q9Y2F5 2266 aa8.71□□□□□ -1.01
SDF2-204ENST00000587338 BLACEA4D250 179 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 IGLON5A6NGN9 336 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 NEMP1O14524 444 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 CETN3O15182 167 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 YY2O15391 372 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 SMAD6O43541 496 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 CLDN11O75508 207 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 IGLV3-25P01717 112 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 TPM3P06753 285 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 RHOCP08134 193 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 SLC2A3P11169 496 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 TSHRP16473 764 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 ITGB7P26010 798 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 CCR1P32246 355 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 ACADSBP45954 432 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 ZNF75DP51815 510 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PFN3P60673 137 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 YWHAZP63104 245 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 FOXK1P85037 733 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 FKBP3Q00688 224 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 SERINC3Q13530 473 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 AUHQ13825 339 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 PTK2BQ14289 1009 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 EDRF1Q3B7T1 1238 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 DPY19L3Q6ZPD9 716 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PARS2Q7L3T8 475 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 BEND5Q7L4P6 421 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PPM1KQ8N3J5 372 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 FAM26EQ8N5C1 309 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 SPC24Q8NBT2 197 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 JPH3Q8WXH2 748 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 KAT5Q92993 513 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 TMEM74Q96NL1 305 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PSMB7Q99436 277 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 KLF6Q99612 283 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 XPO4Q9C0E2 1151 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 CLPBQ9H078 707 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 VPS16Q9H269 839 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 ADNPQ9H2P0 1102 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 TAB2Q9NYJ8 693 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 FOXJ2Q9P0K8 574 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PNMA8BQ9ULN7 279 aaPredicted RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 COQ4Q9Y3A0 265 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 FADS3Q9Y5Q0 445 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
SDF2-204ENST00000587338 PRRC2CQ9Y520 2896 aaKnown RBP8.71□□□□□ -1.02
SDF2-204ENST00000587338 A0A1W2PQM1 296 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 E5RJQ4 531 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 M0QYT0 321 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 CNTN5O94779 1100 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 CCKBRP32239 447 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 ETV5P41161 510 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 CASRP41180 1078 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 GPD2P43304 727 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 DNA2P51530 1060 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 CLCN6P51797 869 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 COPB1P53618 953 aaKnown RBP8.7□□□□□ -1.02
SDF2-204ENST00000587338 MAPK10P53779 464 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 POLE2P56282 527 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 MCCD1P59942 119 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms