RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 PRORYQ9H606 182 aa14.22□□□□□ -0.13
ATG4D-206ENST00000586863 NOL6Q9H6R4 1146 aaKnown RBP14.22□□□□□ -0.13
ATG4D-206ENST00000586863 COL6A6A6NMZ7 2263 aa14.22□□□□□ -0.13
ATG4D-206ENST00000586863 ANKRD36A6QL64 1941 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 NEMP2A6NFY4 417 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 NEMP1O14524 444 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 FPGTO14772 594 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 RRP8O43159 456 aaKnown RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 TSPAN6O43657 245 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 TMCC1O94876 653 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 KRT3P12035 628 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 NSFP46459 744 aaKnown RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 GEMIN4P57678 1058 aaKnown RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 PFN3P60673 137 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 SNRPD1P62314 119 aaKnown RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 EIF2B5Q13144 721 aaKnown RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 SGCGQ13326 291 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-206ENST00000586863 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 MYLK3Q32MK0 819 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 WDR59Q6PJI9 974 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 ZSCAN30Q86W11 494 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 PYROXD2Q8N2H3 581 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 DENND6BQ8NEG7 585 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 BAP1Q92560 729 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 RAB7BQ96AH8 199 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 KLHL32Q96NJ5 620 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 DUSP23Q9BVJ7 150 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 KLC2Q9H0B6 622 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 RETREG1Q9H6L5 497 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 ADAM22Q9P0K1 906 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 HPCAL4Q9UM19 191 aa14.21□□□□□ -0.13
ATG4D-206ENST00000586863 PIEZO2Q9H5I5 2752 aa14.21□□□□□ -0.14
ATG4D-206ENST00000586863 SETXQ7Z333 2677 aaKnown RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 LRP4O75096 1905 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 H3BM21 787 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 AREL1O15033 823 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 CCP110O43303 1012 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 KDELR3O43731 214 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 CSO75390 466 aaKnown RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 MPOP05164 745 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 GP1BAP07359 652 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 JUNDP17535 347 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 GPD1P21695 349 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 ACTN2P35609 894 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 IGFALSP35858 605 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 STAT1P42224 750 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 COPB1P53618 953 aaKnown RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 SYCP1Q15431 976 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 ZNF354CQ86Y25 554 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 PHF13Q86YI8 300 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 RBFAQ8N0V3 343 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 RTL3Q8N8U3 475 aaKnown RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 C3orf20Q8ND61 904 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 IFI44Q8TCB0 444 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 ASB12Q8WXK4 309 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 FCRL3Q96P31 734 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 UBL7Q96S82 380 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 SELENOOQ9BVL4 669 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 OSBPL1AQ9BXW6 950 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 TCEAL2Q9H3H9 227 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 USP29Q9HBJ7 922 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 LMBRD1Q9NUN5 540 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
ATG4D-206ENST00000586863 IPO11Q9UI26 975 aaKnown RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 PNMA8BQ9ULN7 279 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-206ENST00000586863 UNC13CQ8NB66 2214 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 TCRBV5S1A1TA0A578 114 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 EIF4E1BA6NMX2 242 aaKnown RBP14.19□□□□□ -0.14
ATG4D-206ENST00000586863 AQP9O43315 295 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 BUB1O43683 1085 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 POP4O95707 220 aaKnown RBP14.19□□□□□ -0.14
ATG4D-206ENST00000586863 ITIH2P19823 946 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 EPHB2P29323 1055 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 GABREP78334 506 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 TLE3Q04726 772 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 CDKN3Q16667 212 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 DEFB133Q30KQ1 61 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 ZCCHC8Q6NZY4 707 aaKnown RBP14.19□□□□□ -0.14
ATG4D-206ENST00000586863 GUSBP11Q6P575 273 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 GDPD4Q6W3E5 623 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 MON1BQ7L1V2 547 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 VPS36Q86VN1 386 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 SPACA3Q8IXA5 215 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 MAPK15Q8TD08 544 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 LMX1AQ8TE12 382 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 CENPTQ96BT3 561 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 ARHGEF26Q96DR7 871 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 HMCESQ96FZ2 354 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 GDAP1L1Q96MZ0 367 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 DAAM1Q9Y4D1 1078 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 CSNK1G3Q9Y6M4 447 aa14.19□□□□□ -0.14
ATG4D-206ENST00000586863 ZSCAN5CA6NGD5 496 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 SIGLEC16A6NMB1 481 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 LGALS16A8MUM7 142 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms