RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 GFRA3O60609 400 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 FSBPO95073 299 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3HP0C7X1 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 CCNB1P14635 433 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 ITGB7P26010 798 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 ADPRHP54922 357 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 NSUN2Q08J23 767 aaKnown RBP eCLIP21.72■■□□□ 1.07
RETREG3-204ENST00000586796 HNRNPDQ14103 355 aaKnown RBP21.72■■□□□ 1.07
RETREG3-204ENST00000586796 ZNF805Q5CZA5 627 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 PIP5KL1Q5T9C9 394 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 AGBL4Q5VU57 503 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 DCAF12L1Q5VU92 463 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3GQ6DHY5 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3CQ6IPX1 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 FBXL19Q6PCT2 694 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 NCEH1Q6PIU2 408 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 RGL4Q8IZJ4 473 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3Q8IZP1 549 aaPredicted RBP21.72■■□□□ 1.07
RETREG3-204ENST00000586796 DCLK2Q8N568 766 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 PAF1Q8N7H5 531 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TRIM58Q8NG06 486 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 MAML1Q92585 1016 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 PIGKQ92643 395 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 OLFM3Q96PB7 478 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 SCUBE2Q9NQ36 999 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 PYCARDQ9ULZ3 195 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 ATXN2Q99700 1313 aaKnown RBP21.72■■□□□ 1.07
RETREG3-204ENST00000586796 LRRC72A6NJI9 287 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 JCHAINP01591 159 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 ITPKAP23677 461 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 MAOBP27338 520 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 PTPN7P35236 360 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 HSPA9P38646 679 aaKnown RBP21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CSNK1DP48730 415 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 NEK3P51956 506 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CCDC15Q0P6D6 951 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 PARS2Q7L3T8 475 aaKnown RBP21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CYP2U1Q7Z449 544 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CAMK1DQ8IU85 385 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 TEX26Q8N6G2 289 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CADM4Q8NFZ8 388 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 FOXJ1Q92949 421 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 VOPP1Q96AW1 172 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 ZNF419Q96HQ0 510 aaPredicted RBP21.71■■□□□ 1.07
RETREG3-204ENST00000586796 LOXL4Q96JB6 756 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 FAM118BQ9BPY3 351 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 HDAC8Q9BY41 377 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CEP41Q9BYV8 373 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 CPEB1Q9BZB8 566 aaKnown RBP21.71■■□□□ 1.07
RETREG3-204ENST00000586796 EFR3BQ9Y2G0 817 aa21.71■■□□□ 1.07
RETREG3-204ENST00000586796 C16orf96A6NNT2 1141 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 METTL12A8MUP2 240 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 SLC7A4O43246 635 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 TJP3O95049 919 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 EPN2O95208 641 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 RETP07949 1114 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 BCL2L1Q07817 233 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 LRRC73Q5JTD7 316 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 SPDYCQ5MJ68 293 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 CFAP58Q5T655 872 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 SEL1L2Q5TEA6 688 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 OR2T34Q8NGX1 318 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 TFB1MQ8WVM0 346 aaKnown RBP21.7■■□□□ 1.06
RETREG3-204ENST00000586796 RUBCNQ92622 972 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 NUDCD1Q96RS6 583 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 MGME1Q9BQP7 344 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 MIR1-1HGQ9H1L0 117 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 SUV39H2Q9H5I1 410 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 ATP13A3Q9H7F0 1226 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 PLXND1Q9Y4D7 1925 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 SHROOM3Q8TF72 1996 aa21.7■■□□□ 1.06
RETREG3-204ENST00000586796 THADAQ6YHU6 1953 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 H7C0C1 242 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 APOC4-APOC2K7ER74 178 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 PLRG1O43660 514 aaKnown RBP21.69■■□□□ 1.06
RETREG3-204ENST00000586796 APOC2P02655 101 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 HLA-DQB2P05538 268 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 ADRB3P13945 408 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 SERPINA4P29622 427 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 ATP5OP48047 213 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 TAS2R38P59533 333 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 OTUD4Q01804 1114 aaKnown RBP21.69■■□□□ 1.06
RETREG3-204ENST00000586796 SPEM2Q0P670 501 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 ZBTB17Q13105 803 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 GRM3Q14832 879 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 SYCP2LQ5T4T6 812 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 KIAA0895LQ68EN5 471 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 TTC7BQ86TV6 843 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 ALYREFQ86V81 257 aaKnown RBP21.69■■□□□ 1.06
RETREG3-204ENST00000586796 ABCA7Q8IZY2 2146 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 FATE1Q969F0 183 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 BIRC7Q96CA5 298 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 NSMCE3Q96MG7 304 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 TUBGCP5Q96RT8 1024 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 SEMA3CQ99985 751 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 BRD8Q9H0E9 1235 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 SMOC1Q9H4F8 434 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 NOD2Q9HC29 1040 aa21.69■■□□□ 1.06
RETREG3-204ENST00000586796 BCLAF3A2AJT9 711 aaKnown RBP21.68■■□□□ 1.06
RETREG3-204ENST00000586796 USP27XA6NNY8 438 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms