RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 VAT1Q99536 393 aa16.96■□□□□ 0.3
GCDH-203ENST00000585420 PDFQ9HBH1 243 aa16.96■□□□□ 0.3
GCDH-203ENST00000585420 VPS51Q9UID3 782 aa16.96■□□□□ 0.3
GCDH-203ENST00000585420 TTLL3Q9Y4R7 772 aa16.96■□□□□ 0.3
GCDH-203ENST00000585420 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 OPHN1O60890 802 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 PEX11BO96011 259 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 MT-CO1P00395 513 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 UQCRHP07919 91 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 RENBPP51606 427 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
GCDH-203ENST00000585420 TMCO4Q5TGY1 634 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 MARC1Q5VT66 337 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 LINGO4Q6UY18 593 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 KDM1BQ8NB78 822 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 MAML1Q92585 1016 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 FATE1Q969F0 183 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 MRGPRX1Q96LB2 322 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 ZNF599Q96NL3 588 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 RBM22Q9NW64 420 aaKnown RBP eCLIP16.95■□□□□ 0.39e-6■□□□□ 9.6
GCDH-203ENST00000585420 UBA2Q9UBT2 640 aaPredicted RBP16.95■□□□□ 0.3
GCDH-203ENST00000585420 TRHDEQ9UKU6 1024 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 INVSQ9Y283 1065 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 WDR87Q6ZQQ6 2873 aa16.95■□□□□ 0.3
GCDH-203ENST00000585420 FANCMQ8IYD8 2048 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 F5H423 210 aaPredicted RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 MMP13P45452 471 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 RPL21P46778 160 aaKnown RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 BASP1P80723 227 aaKnown RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 ARF5P84085 180 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 SLC10A7Q0GE19 358 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 CAMK2GQ13555 558 aaPredicted RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 LBRQ14739 615 aaKnown RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 TRADDQ15628 312 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 HNRNPA1L2Q32P51 320 aaKnown RBP16.94■□□□□ 0.3
GCDH-203ENST00000585420 TMPRSS6Q8IU80 811 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 FRMD1Q8N878 549 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 RLN3Q8WXF3 142 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 IFT81Q8WYA0 676 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 LRRC45Q96CN5 670 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 SNF8Q96H20 258 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 IL12RB2Q99665 862 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 PRSS16Q9NQE7 514 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 GDF3Q9NR23 364 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 RAB6BQ9NRW1 208 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 SUN2Q9UH99 717 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 ACTL7AQ9Y615 435 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 DNAH14Q0VDD8 3507 aa16.94■□□□□ 0.3
GCDH-203ENST00000585420 PROB1E7EW31 1015 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ZBTB24O43167 697 aaPredicted RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 SIN3BO75182 1162 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 RPP40O75818 363 aaKnown RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 CNR2P34972 360 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 NNMTP40261 264 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ZNF235Q14590 738 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 FAXCQ5TGI0 409 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 RETSATQ6NUM9 610 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 C4orf22Q6V702 233 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 CASKIN2Q8WXE0 1202 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 PTPRN2Q92932 1015 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ZNF419Q96HQ0 510 aaPredicted RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 TEKT5Q96M29 485 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 PARD6BQ9BYG5 372 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 SLC25A13Q9UJS0 675 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 K7ERQ8 282 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ZMPSTE24O75844 475 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 METTL18O95568 372 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 HLA-DQB2P05538 268 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 CALCOCO2Q13137 446 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 RFTN1Q14699 578 aaPredicted RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 ACCSLQ4AC99 568 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 C9orf64Q5T6V5 341 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 BBS5Q8N3I7 341 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.93■□□□□ 0.3
GCDH-203ENST00000585420 FAM160A2Q8N612 972 aaPredicted RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 CNTD1Q8N815 330 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 FRS2Q8WU20 508 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 SEC14L1Q92503 715 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 RUBCNQ92622 972 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 CINPQ9BW66 212 aaPredicted RBP16.93■□□□□ 0.3
GCDH-203ENST00000585420 NT5MQ9NPB1 228 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 FAM114A2Q9NRY5 505 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 HS3ST2Q9Y278 367 aa16.93■□□□□ 0.3
GCDH-203ENST00000585420 EML5Q05BV3 1969 aa16.92■□□□□ 0.3
GCDH-203ENST00000585420 CKAP5Q14008 2032 aa16.92■□□□□ 0.3
GCDH-203ENST00000585420 SMAD6O43541 496 aaKnown RBP16.92■□□□□ 0.3
GCDH-203ENST00000585420 SEC31AO94979 1220 aaKnown RBP16.92■□□□□ 0.3
GCDH-203ENST00000585420 SRCP12931 536 aa16.92■□□□□ 0.3
GCDH-203ENST00000585420 NFKB1P19838 968 aa16.92■□□□□ 0.3
GCDH-203ENST00000585420 IVDP26440 423 aa16.92■□□□□ 0.3
GCDH-203ENST00000585420 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
GCDH-203ENST00000585420 DRG2P55039 364 aaKnown RBP16.92■□□□□ 0.3
GCDH-203ENST00000585420 GEMIN4P57678 1058 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms