RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 HTR1BP28222 390 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 TNFRSF8P28908 595 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 CCR1P32246 355 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 ACADSBP45954 432 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 NASPP49321 788 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 PEX5P50542 639 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 HK3P52790 923 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 COPB1P53618 953 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 CUL2Q13617 745 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 ARHGEF7Q14155 803 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 CNGA2Q16280 664 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 MAP9Q49MG5 647 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 PMF1Q6P1K2 205 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 MAMDC2Q7Z304 686 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 SLITRK4Q8IW52 837 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 DCAF4L2Q8NA75 395 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 USP28Q96RU2 1077 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 PRMT1Q99873 361 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 DDA1Q9BW61 102 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 ASPSCR1Q9BZE9 553 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 MIS12Q9H081 205 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 INTS2Q9H0H0 1204 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 TCEAL2Q9H3H9 227 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 TBC1D30Q9Y2I9 924 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 RNF215Q9Y6U7 377 aa8.9□□□□□ -0.98
CDK5RAP3-224ENST00000582275 RELNP78509 3460 aa8.9□□□□□ -0.99
CDK5RAP3-224ENST00000582275 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MED13Q9UHV7 2174 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 EFCAB7A8K855 629 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MKRN2OSH3BPM6 223 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 M0QYV0 167 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CASC3O15234 703 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 POLR2DO15514 142 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CUTAO60888 179 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CPNE6O95741 557 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 FYNP06241 537 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MAN1A1P33908 653 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 UGT1A3P35503 534 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 EIF4A3P38919 411 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 NUMBP49757 651 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CDH4P55283 916 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 SLC20A2Q08357 652 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CDC20Q12834 499 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 STK4Q13043 487 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 TRA2AQ13595 282 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 TPRG1LQ5T0D9 272 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CERCAMQ5T4B2 595 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CAPRIN2Q6IMN6 1127 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 RETSATQ6NUM9 610 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 FBXL22Q6P050 247 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 C22orf39Q6P5X5 142 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 DPY19L3Q6ZPD9 716 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 SPRED1Q7Z699 444 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 PIM3Q86V86 326 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CIR1Q86X95 450 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CEP57L1Q8IYX8 460 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 PCDH20Q8N6Y1 951 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 Q8N9G6 341 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 LINC00301Q8NCQ3 95 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 KIAA0895Q8NCT3 520 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 GPR156Q8NFN8 814 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CLEC4CQ8WTT0 213 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 JPH3Q8WXH2 748 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 SEMA4DQ92854 862 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CENPTQ96BT3 561 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MOCOSQ96EN8 888 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 EEF2KMTQ96G04 330 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MED15Q96RN5 788 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 HEPHQ9BQS7 1158 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CEP44Q9C0F1 390 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 ZSCAN16Q9H4T2 348 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 POPDC2Q9HBU9 364 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 KCTD3Q9Y597 815 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 SDK2Q58EX2 2172 aa8.89□□□□□ -0.99
CDK5RAP3-224ENST00000582275 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 PIK3R2O00459 728 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 NUDT21O43809 227 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 RAD1O60671 282 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 TM7SF2O76062 418 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MT-CO1P00395 513 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 IGLV3-25P01717 112 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MYL1P05976 194 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 RHOCP08134 193 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 RRM1P23921 792 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 NOP2P46087 812 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 RAB15P59190 212 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CDK17Q00537 523 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 CUL4BQ13620 913 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 AUHQ13825 339 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 EFHC2Q5JST6 749 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 TCTN3Q6NUS6 607 aa8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 SETD3Q86TU7 594 aaPredicted RBP8.88□□□□□ -0.99
CDK5RAP3-224ENST00000582275 HID1Q8IV36 788 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms