RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 DUPD1Q68J44 220 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 MFSD7Q6UXD7 560 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 RFX6Q8HWS3 928 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 GAB3Q8WWW8 586 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 SNF8Q96H20 258 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 CELF6Q96J87 481 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 FOXP3Q9BZS1 431 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 WHRNQ9P202 907 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 WASF3Q9UPY6 502 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
CSNK1D-220ENST00000581737 CFAP69A5D8W1 941 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 BHMG1C9JSJ3 638 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SGK1O00141 431 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SMAPO00193 183 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 DFFAO00273 331 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ATP9BO43861 1147 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SNAP91O60641 907 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ZMPSTE24O75844 475 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ITIH2P19823 946 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 CTSOP43234 321 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SERPINH1P50454 418 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SLMAPQ14BN4 828 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 CRY1Q16526 586 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 HNRNPA1L2Q32P51 320 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 KAZNQ674X7 775 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 NCBP2-AS2Q69YL0 99 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SLC9A4Q6AI14 798 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 PSAPL1Q6NUJ1 521 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 AADACL2Q6P093 401 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ARHGAP12Q8IWW6 846 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 CAMKK1Q8N5S9 505 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 NPWQ8N729 165 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 TSTD1Q8NFU3 115 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ACOX2Q99424 681 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 HEMGNQ9BXL5 484 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 CEP44Q9C0F1 390 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SLC39A8Q9C0K1 460 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 KLC2Q9H0B6 622 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 TMEM245Q9H330 911 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 SP110Q9HB58 689 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ETNK2Q9NVF9 386 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 ZMIZ1Q9ULJ6 1067 aa13.71□□□□□ -0.21
CSNK1D-220ENST00000581737 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 EDDM13A0A1B0GTR0 161 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 MFSD11O43934 449 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PRAMEF11O60813 436 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ADAM23O75077 832 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 APBB3O95704 486 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 APOC2P02655 101 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 EPHX1P07099 455 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 TGM2P21980 687 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PRKCHP24723 683 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ACTN2P35609 894 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 WASP42768 502 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PTGIRP43119 386 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 NR2C2P49116 596 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ARF5P84085 180 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PCGF5Q86SE9 256 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 PQLC3Q8N755 202 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 NSMCE1Q8WV22 266 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 C1orf54Q8WWF1 131 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 RPL10LQ96L21 214 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 TRIM51Q9BSJ1 452 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ZDHHC4Q9NPG8 344 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 IPO11Q9UI26 975 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF148Q9UQR1 794 aa13.7□□□□□ -0.22
CSNK1D-220ENST00000581737 LIASO43766 372 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 ITGAVP06756 1048 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 SRCP12931 536 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 GLDCP23378 1020 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 HSPA9P38646 679 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 MPLP40238 635 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 NUMBP49757 651 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms