RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IL1R2P27930 398 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 CD38P28907 300 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 PMLP29590 882 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 CTSKP43235 329 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 CCNHP51946 323 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RACK1P63244 317 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 BNIP3Q12983 259 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 CYTH1Q15438 398 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 DBX2Q6ZNG2 339 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ADAT2Q7Z6V5 191 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 PRPF39Q86UA1 669 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ZNF354CQ86Y25 554 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RYBPQ8N488 228 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 RTL3Q8N8U3 475 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 PNPLA1Q8N8W4 532 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SETD7Q8WTS6 366 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SYN2Q92777 582 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SERAC1Q96JX3 654 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 MYOCQ99972 504 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 HEPHQ9BQS7 1158 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SNRNP25Q9BV90 132 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ZDHHC5Q9C0B5 715 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 SLC39A8Q9C0K1 460 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 TSPY26PQ9H489 355 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ALG2Q9H553 416 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ZDHHC6Q9H6R6 413 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 AASDHPPTQ9NRN7 309 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 HPCAL4Q9UM19 191 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 ZFR2Q9UPR6 939 aaKnown RBP9.87□□□□□ -0.83
TOP3A-211ENST00000581536 WASF3Q9UPY6 502 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 BTBD3Q9Y2F9 522 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
TOP3A-211ENST00000581536 MYLKQ15746 1914 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 VILLO15195 856 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 LATO43561 262 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 LRCH4O75427 683 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 RNF8O76064 485 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PRNPP04156 253 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PRLRP16471 622 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 EIF4A3P38919 411 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 RECQLP46063 649 aaPredicted RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 GRIA4P48058 902 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PAPOLAP51003 745 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 AIF1P55008 147 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 TPI1P60174 286 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SIM1P81133 766 aaPredicted RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SERINC3Q13530 473 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SHBQ15464 509 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 TEAD4Q15561 434 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 TRIP6Q15654 476 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 MYLK3Q32MK0 819 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CCDC122Q5T0U0 273 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SEL1L3Q68CR1 1132 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PPP1R2P3Q6NXS1 205 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 ARHGAP36Q6ZRI8 547 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 ERN2Q76MJ5 926 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SLCO6A1Q86UG4 719 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 NAXDQ8IW45 347 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 PCDH20Q8N6Y1 951 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 ISG20Q96AZ6 181 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CHP1Q99653 195 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CEP44Q9C0F1 390 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 SLC32A1Q9H598 525 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 RETREG1Q9H6L5 497 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 LRRC19Q9H756 370 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CATSPERBQ9H7T0 1116 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 FZD3Q9NPG1 666 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 CWC15Q9P013 229 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 GGT7Q9UJ14 662 aa9.86□□□□□ -0.83
TOP3A-211ENST00000581536 BZW2Q9Y6E2 419 aaKnown RBP9.86□□□□□ -0.83
TOP3A-211ENST00000581536 TLR4O00206 839 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 EEF2KO00418 725 aaKnown RBP9.85□□□□□ -0.83
TOP3A-211ENST00000581536 KRIT1O00522 736 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 SLC7A4O43246 635 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 PRPSAP2O60256 369 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 TMCC1O94876 653 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 PCDH8O95206 1070 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 POP4O95707 220 aaKnown RBP9.85□□□□□ -0.83
TOP3A-211ENST00000581536 CER1O95813 267 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 PAK4O96013 591 aaPredicted RBP9.85□□□□□ -0.83
TOP3A-211ENST00000581536 ERCC2P18074 760 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 AMPD1P23109 780 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 ADKP55263 362 aaKnown RBP9.85□□□□□ -0.83
TOP3A-211ENST00000581536 C21orf59P57076 290 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 CLDN2P57739 230 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 YBEYP58557 167 aaPredicted RBP9.85□□□□□ -0.83
TOP3A-211ENST00000581536 FGL2Q14314 439 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 ZNF423Q2M1K9 1284 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 SMTNL2Q2TAL5 461 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 ZNF284Q2VY69 593 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 ATP13A4Q4VNC1 1196 aa9.85□□□□□ -0.83
TOP3A-211ENST00000581536 LRRC73Q5JTD7 316 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms