RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PACSIN1Q9BY11 444 aa25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 HDAC8Q9BY41 377 aa25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 ZDHHC6Q9H6R6 413 aa25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 PREBQ9HCU5 417 aa25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 CWC15Q9P013 229 aaKnown RBP25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 IGSF10Q6WRI0 2623 aa25.25■■□□□ 1.63
CDC42EP4-205ENST00000580315 ADAMTS20P59510 1910 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 TMCC1O94876 653 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 TMEM253P0C7T8 217 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 RARAP10276 462 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 TCF4P15884 667 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 NUDT1P36639 197 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 RACK1P63244 317 aaKnown RBP25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 RAD51Q06609 339 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 PIP5KL1Q5T9C9 394 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 LAYNQ6UX15 382 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 ADAT2Q7Z6V5 191 aaKnown RBP25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 PRPF39Q86UA1 669 aaKnown RBP25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 LZTR1Q8N653 840 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 SKA1Q96BD8 255 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 GDAP1L1Q96MZ0 367 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 KLC2Q9H0B6 622 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 RBSNQ9H1K0 784 aa25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 UBA2Q9UBT2 640 aaPredicted RBP25.24■■□□□ 1.63
CDC42EP4-205ENST00000580315 GOLGA8CPA6NN73 597 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 KCNK3O14649 394 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 POP4O95707 220 aaKnown RBP25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 IGSF6O95976 241 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 ITGB7P26010 798 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 RHOAP61586 193 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 SLC25A11Q02978 314 aaKnown RBP25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 DPYSQ14117 519 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 COL28A1Q2UY09 1125 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 PDZD3Q86UT5 571 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 ORAI3Q9BRQ5 295 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 SLC39A8Q9C0K1 460 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 SPTLC3Q9NUV7 552 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 RAXQ9Y2V3 346 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 PTPRBP23467 1997 aa25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 NYNRINQ9P2P1 1898 aaKnown RBP25.23■■□□□ 1.63
CDC42EP4-205ENST00000580315 C10orf142B7Z368 130 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 KRIT1O00522 736 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 PROSCO94903 275 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 PAPOLAP51003 745 aaKnown RBP25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 NEK3P51956 506 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 PPP2CBP62714 309 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 PPP2CAP67775 309 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 KRT81Q14533 505 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 MYLK3Q32MK0 819 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 NEK5Q6P3R8 708 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 TRIM69Q86WT6 500 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 MARCH9Q86YJ5 346 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 OSBPL1AQ9BXW6 950 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 AASDHPPTQ9NRN7 309 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 DKK4Q9UBT3 224 aa25.22■■□□□ 1.63
CDC42EP4-205ENST00000580315 H0Y8X5 98 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 DFFAO00273 331 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 TNFSF14O43557 240 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 LATO43561 262 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 PCDHGA12O60330 932 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 PRAMEF11O60813 436 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 GRK6P43250 576 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 ZNF75DP51815 510 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 C21orf59P57076 290 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 SLC45A4Q5BKX6 768 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 AFMIDQ63HM1 303 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 FBXL19Q6PCT2 694 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 POLNQ7Z5Q5 900 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 GALNT15Q8N3T1 639 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 OR6K2Q8NGY2 324 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 MRFAP1L1Q96HT8 127 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 SERAC1Q96JX3 654 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 SLC6A18Q96N87 628 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 DMTF1Q9Y222 760 aa25.21■■□□□ 1.63
CDC42EP4-205ENST00000580315 CCT8P50990 548 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 TAS2R38P59533 333 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 SETMARQ53H47 684 aaPredicted RBP25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 ATXN7L2Q5T6C5 722 aaPredicted RBP25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 TXNRD3NBQ6F5E7 133 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 TMCO3Q6UWJ1 677 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 HNRNPLLQ8WVV9 542 aaKnown RBP25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 CSPG4P5Q96PW8 444 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 EBF2Q9HAK2 575 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 SP110Q9HB58 689 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 PCDH18Q9HCL0 1135 aa25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 RCOR3Q9P2K3 495 aaPredicted RBP25.2■■□□□ 1.62
CDC42EP4-205ENST00000580315 J3KR12 359 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 RNF103O00237 685 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 RNGTTO60942 597 aaKnown RBP25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 PCDH8O95206 1070 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 ADRB3P13945 408 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 MAT2AP31153 395 aaKnown RBP25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 CTSKP43235 329 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 CDH6P55285 790 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 SOWAHCQ53LP3 525 aaPredicted RBP25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 ZNF805Q5CZA5 627 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 NAPEPLDQ6IQ20 393 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 ARHGAP12Q8IWW6 846 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 RHOT2Q8IXI1 618 aa25.19■■□□□ 1.62
CDC42EP4-205ENST00000580315 NPWQ8N729 165 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms